Fulvivirga maritima: LVD15_06580
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Entry
LVD15_06580 CDS
T09268
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fmm
Fulvivirga maritima
Pathway
fmm03030
DNA replication
fmm03410
Base excision repair
fmm03420
Nucleotide excision repair
fmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVD15_06580 (polA)
03410 Base excision repair
LVD15_06580 (polA)
03420 Nucleotide excision repair
LVD15_06580 (polA)
03440 Homologous recombination
LVD15_06580 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmm03032
]
LVD15_06580 (polA)
03400 DNA repair and recombination proteins [BR:
fmm03400
]
LVD15_06580 (polA)
Enzymes [BR:
fmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVD15_06580 (polA)
DNA replication proteins [BR:
fmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LVD15_06580 (polA)
DNA repair and recombination proteins [BR:
fmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LVD15_06580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVD15_06580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Pro-kuma_activ
IMS_HHH
DNA_pol_lambd_f
RNase_H_2
Nop
HHH
DUF3913
Motif
Other DBs
NCBI-ProteinID:
UII28087
LinkDB
All DBs
Position
complement(1560209..1563010)
Genome browser
AA seq
933 aa
AA seq
DB search
MSKPEKKLFLLDAYALIYRAHFAFSKSPRISSKGINTGVMFGFTNTLLEVLHKQKPTHIA
VAFDTSAPTFRHERYVEYKAHREETPEDIKTGIPIVKDIVRAFNIPVIELDGYEADDIIG
TLSKKAAENNFEVFMMTPDKDYGQLVQEHVYLYKPAYMGNAVDILGVEEVCKKWDIESVD
QVADMLGLQGDASDNIPGIPGIGPKTAAKLIKTYGSVENLVEHADDLKGKQKENVQNFGA
QGILSKELATINTEVPVEFNEEDLLYTGPDKEKLQPIFDELEFRTLLKRVFGEEASSASA
SSASSSGQLSMFSAESKQAIEVEEEVVTEKSTIKTVAHEYHLITTPEKRKELATYLKKQK
EFCFDTETTNIDAVEAEVVGIAFSYVKGEAFYVSVPLDREQAKEVLNDFKEVLEDTDIVK
IGQNLKYDILVLKKYDIHVQGQLFDTMLAHYVLEPETKHSMDMIAEQYLNYIPVPISDLL
GPKGKKQLNMKDLAPEEVVEYAGEDADITLQLKEVLDKEIKKEEKLAELLDEVEYPLVPV
LADMEFEGVRIDKDALVDMSKELQEASLKVQQEIYELAGQEFNIASPKQLGEVLFDKLKL
VDKPKKTKSGQYATGEEILSRLASEHEICSKILDFREYQKLKSTYVDALPKLISGDGRVH
TDYGQAVAATGRLSSNNPNLQNIPIRTEKGREIRKAFVPRDDNHVLLAADYSQIELRIAA
SFANDKDMIAAFKEGRDIHATTAAKVFNVPVEEVDSNMRRKAKEVNFGIIYGISAFGLSQ
NLNIPRSEASEIIQSYFKEFPSIRDYMDACIEKAREKEYVETIRGRRRYLRDINSKNATM
RGYAERNAINAPIQGSAADIIKIAMVKIHQWLRDEGLKTKMIMQVHDELVFDVPKDELEI
VQPKVIELMTSAVKLEVPMDVEAGVGDNWLKAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacccgagaaaaaacttttcctgttagatgcttacgcattaatatatagagcc
cattttgcctttagtaaaagccctagaattagttctaaagggattaacaccggcgtaatg
tttggttttaccaatacccttttggaagtcttgcataaacaaaagcccactcacatagca
gtagcttttgatacttcagctcctacctttcggcatgagcgatatgtggagtataaagcg
caccgtgaggagactcccgaagatattaagacgggtattccgatagtgaaagatattgta
agggcatttaacatacctgtgatagagctagatggctatgaggctgatgacattataggt
actttatctaaaaaggccgctgaaaataattttgaggtgtttatgatgactcccgataaa
gattatggtcagctggtgcaggagcatgtatacttatataagcctgcctacatgggtaat
gcggtagatattttaggcgtagaagaggtctgcaaaaagtgggacatagaatctgtagat
caggtggcggatatgctgggtttacagggagatgcttcagataatattcctggtataccg
ggaatcggcccgaaaaccgctgctaagcttataaaaacttatggctcagtagagaatctg
gtagagcatgcagatgatcttaaaggtaagcagaaagagaatgtacagaatttcggagct
cagggaatactctctaaagaactggctactatcaatactgaagtgccggtagagtttaat
gaagaagacctattatacactggtcctgataaagagaagctacaacctatttttgatgag
ttggaatttagaaccttacttaaaagagtttttggtgaggaggcttcttccgctagcgct
tcaagtgcatcgtcatcagggcaactttctatgtttagtgccgagagtaaacaggctata
gaggtagaagaagaagtagtaacggagaagagcacaataaaaacggtggctcatgaatac
catctgatcactaccccggagaaaaggaaggagcttgctacttatcttaaaaagcaaaag
gaattttgtttcgataccgagactactaatattgatgccgtagaggcagaagtagtaggt
attgctttttcatatgtaaaaggggaagcgttttatgtaagcgtgcctttagatagagag
caggccaaagaggtgctaaatgacttcaaagaggttttagaagatactgatattgttaaa
ataggccagaatttgaaatatgatattctggttttgaagaaatatgatattcatgtgcaa
gggcagcttttcgatactatgctagctcattatgtgctggagcccgaaaccaagcatagc
atggatatgatcgcagagcaatacctaaattatatacctgttcctatttctgacctgctg
gggccgaaaggcaagaagcagttaaatatgaaagaccttgcgcctgaggaggtagtggag
tatgctggagaagatgctgatattactttacagctaaaagaagtgctggataaggaaatc
aaaaaggaagagaaattagcagagcttcttgatgaagtggaatacccgctggtgcccgta
cttgctgatatggagtttgagggagtgcgaatagacaaagatgcgctggttgatatgtct
aaggagttgcaggaggctagcttaaaagtgcagcaagagatctatgaattggcaggacag
gaatttaatattgcttctcctaagcaacttggggaggtgctttttgataagcttaaactg
gtagataagcctaaaaagactaaatcaggtcagtatgctactggagaagaaatattgagc
cgattagcttctgagcatgagatatgcagcaaaattcttgattttagagaataccaaaag
ctgaagtctacttatgtagatgctttgcctaagctaattagtggtgatggtcgggttcat
accgattatggtcaggcagtggcagctacaggaagacttagctctaataatcctaatctt
caaaacattcctatcagaactgagaagggaagagaaataagaaaggcctttgttcccaga
gatgataatcatgtgctgctggctgccgattatagccagatagaattgagaatagcggcc
tcttttgcgaatgataaggacatgatagctgcttttaaagaaggcagagacattcatgct
actaccgcggctaaagtatttaatgtgccggtagaggaagtagattcgaatatgagaaga
aaggccaaagaggtgaattttggtattatatatggaatttcagcttttggcttatcgcaa
aacctaaacatacctcgatctgaagctagtgagatcattcaatcatattttaaggaattt
ccttcaataagggattatatggatgcttgtattgaaaaggctcgtgaaaaggaatatgtg
gagaccataagaggcagaagaaggtatctgagagatattaactctaaaaatgctaccatg
cgtggctatgctgagcgaaatgctattaacgctcctattcagggtagtgcggcagatatt
attaaaatagctatggtaaaaattcatcaatggctacgcgatgaaggcctgaaaaccaaa
atgattatgcaggtgcatgatgaattggtgtttgatgtgcctaaagatgaactggaaata
gtgcagcctaaggtgatagagctaatgacttcagccgtgaagcttgaagtgcctatggat
gtagaagctggcgtaggtgacaattggcttaaagcccattaa
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