Fulvivirga maritima: LVD15_11155
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Entry
LVD15_11155 CDS
T09268
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fmm
Fulvivirga maritima
Pathway
fmm02020
Two-component system
fmm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fmm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LVD15_11155 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LVD15_11155 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmm03021
]
LVD15_11155 (rpoN)
Transcription machinery [BR:
fmm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LVD15_11155 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
SF3b1
Motif
Other DBs
NCBI-ProteinID:
UII28955
LinkDB
All DBs
Position
2609908..2611344
Genome browser
AA seq
478 aa
AA seq
DB search
MQKLGLTQSLQQKLSPQQIQFIKLLQIPTAELESRVEEELEENPALEEGKEEESEDITDD
YEDTDTQQDEDLDVEDYLRDDDFSGYKMQGDGDNEDKEMPIAMHSTLNERLMDQLGFLRL
DDRQYVIGKQLIGSIESDGYIRRDVDSIINDLAFSQNIDTDVDEVEEILRKIQDFDPPGI
AARDLQECLLLQLERRPDDQNVDVYVAKKILGECFDEFTKKHYSKIMKKLDIEDEDYVKD
AIELIRKLNPKPGGSSTGLVRTQYLIPDFILSNDNGELELSLNSRNAPELRVSRSYSEML
QAYDKSDKSDKKLKETVSFVKQKLDAAKWFIDAIKQRQHTLLNTMRAIVDFQYEYFLEGD
ESKLRPMILKDIANIINMDISTVSRVANSKAVQTDFGIFPLKYFFSEGIATDSGEDVSSR
EVKNELKMIIDEEDKKKPLSDDKLEKLLKAKGYNIARRTVAKYREQMNIPVARLRKEL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcttggtttaacccaaagtttacaacaaaaattatctccgcagcaaattcaa
ttcattaagctgctacagatccctactgccgagctggaaagcagggttgaagaggaactg
gaggagaatccggctttggaagaaggaaaagaagaagagtcagaggatatcacagatgat
tatgaagatacagatactcagcaagatgaagatctggatgtagaagattatctgcgagac
gatgattttagtggctataaaatgcaaggcgacggcgataatgaagataaagaaatgccg
atagctatgcattctactcttaatgagcgcctgatggatcagctggggtttctcaggtta
gatgatcggcaatatgtgataggcaagcaactcatagggagtattgaaagtgatggttat
atccgtagagatgtagattctattattaatgacctggctttttctcaaaatatagatacc
gatgtagatgaggtagaggagattttgcgtaagattcaggactttgatcctccaggaata
gcagccagagatttacaggaatgtctccttttgcagttagaaagaagacctgatgatcag
aatgtagatgtttacgtagctaaaaagatattgggtgagtgctttgatgaatttacaaaa
aagcactatagcaaaataatgaagaagctagacatagaagatgaagactatgttaaagat
gctattgaactcataagaaagctaaaccccaagcccggcggaagctctacaggactggta
agaacacaatacctcattcctgattttatactttctaatgataatggtgagctggagtta
tctttaaactctagaaatgcgccagaacttagagtgagcagatcttattctgaaatgcta
caagcatatgataagagtgataagtctgataaaaagctcaaagaaacggtaagctttgtg
aagcagaagctcgatgccgccaagtggtttattgatgccataaaacaaaggcaacatacc
ttgcttaacactatgcgagcgatagtagactttcagtatgaatatttcctggaaggagat
gaaagtaagcttcgtcctatgattttaaaggacatcgctaatattatcaatatggatatt
tccaccgtttctagggtggcaaatagtaaggctgtgcagactgattttggtattttcccg
cttaagtatttcttctctgaaggtatagctacagactctggtgaagatgtaagtagcaga
gaggtgaagaatgagctgaaaatgattattgatgaggaagataaaaagaagcctcttagt
gatgataaattggagaaattgttaaaagctaaaggctataatatagccagacgtacagtg
gcgaaatatagagaacaaatgaatatacctgtggccaggttaaggaaagagttatag
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