Fulvivirga maritima: LVD15_13390
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Entry
LVD15_13390 CDS
T09268
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fmm
Fulvivirga maritima
Pathway
fmm03420
Nucleotide excision repair
fmm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LVD15_13390
03430 Mismatch repair
LVD15_13390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmm03400
]
LVD15_13390
Enzymes [BR:
fmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVD15_13390
DNA repair and recombination proteins [BR:
fmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVD15_13390
MMR (mismatch excision repair)
Other MMR factors
LVD15_13390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Sgo0707_N2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UII29378
LinkDB
All DBs
Position
complement(3113848..3116112)
Genome browser
AA seq
754 aa
AA seq
DB search
MDYLKSLNEPQYEGVVNTEGPTMIIAGAGSGKTRVLTYRIAYLMEKKGVDPFNILSLTFT
NKAAKEMRDRIEKVVGTDARNLWMGTFHSVFARILRSEADKLGYPSNFTIYDADDAKQLI
KSIVKEMNLDDKVYKPNVVLNRISGAKNRLISWREYIKNPIYRADDESNMKPELGRIYKT
YSERCFKAGAMDFDDLLFNTNVLFKEHLDVLNKYQQRFHYVMVDEFQDTNISQYLITKKL
SAVRQNICVVGDDAQSIYAFRGADIQNILNFEKDYPDLRVIKLEQNYRSTKNIVNAANSI
ISKNRAQLKKNVWTDNDLGTLIELLRATSDNEEGKLVASSIFEEKMQNHLKNSDFAILYR
TNSQSRAMEEALRRMNIKYKIVGGLSFYQRKEIKDLMAYLRYSINHNDEQSLRRIINYPK
RGIGDSSLDKIIVAANENNIGLWDVLTNISSYIPGRVANAVIDFVSLIKRFKIDIENKDA
FEAANLIAKGSGILKALYEDKTVEGLSRYENVQELLNAVKEFVDDPEKEDKSLGSFLQEI
ALITGVDNDKDDDDDKVTMMTIHMAKGLEFKNVYIVGMEEDLFPSQMMLSSRADLEEERR
LFYVAITRAEHKLYLSYALSRYRFGRLKNCEPSRFIDEIDPSFIKVSKRHTKVESRPSSE
GNGDFAKSFVSGIKRTTSSQPVTRKSNYKAPMDFKPSDTSTLKAGMKVEHPKFGYGKVME
MDESGANRKAKVHFDDFGEKTLLLSFAKLRIHSN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggattatttaaaaagcctcaacgagcctcaatatgaaggcgtggtaaacacagaaggt
cctaccatgattatcgcgggtgcgggttcgggaaaaacaagagtactaacttaccgtatt
gcttacctgatggaaaaaaaaggagttgatccttttaatatattatcacttacatttaca
aacaaggccgccaaagaaatgcgcgaccgtatagagaaggtagtaggcactgatgcccgt
aacctatggatgggtactttccactctgtatttgcgcgtatactcaggtctgaggccgat
aagcttggctaccctagcaacttcactatctatgatgctgatgatgccaaacagctcatc
aaatcaatagtaaaagaaatgaaccttgatgataaggtatataagcctaatgtggtactt
aaccgtatttctggagctaaaaaccgccttatatcatggagagaatacatcaaaaaccca
atttaccgagctgacgacgaaagcaatatgaagcctgagctgggtagaatatataaaacc
tactctgagcgctgctttaaagctggagccatggactttgatgacctgctgtttaacacc
aacgtgctttttaaagagcatctggatgtgcttaataaatatcagcaacgctttcattat
gttatggtcgatgagtttcaggatactaacatatctcagtatctcattaccaaaaagctc
tctgccgtacgtcaaaacatttgtgtggtgggtgatgatgcacaaagtatctacgccttc
cgtggtgctgatattcaaaacatactcaattttgaaaaagattaccctgacttaagggtt
ataaagctggaacaaaactatcgttctactaaaaacatagtaaacgcggccaactctatt
attagtaaaaaccgcgctcagctcaagaaaaatgtctggactgataatgatttaggtact
ctaatagaactactacgagccacttcagataacgaagaaggaaagctggtagcctcatct
attttcgaagagaaaatgcaaaatcatcttaaaaatagtgattttgctatcctttataga
accaatagtcagtcacgtgctatggaagaagccctaagaaggatgaacattaagtacaaa
atagtgggtggtctttctttctaccagagaaaggagatcaaagacttaatggcttatctg
aggtattctattaaccataatgacgaacagtctttaagacggataatcaattaccctaag
cgtggtattggtgattccagccttgacaaaataattgtagcggccaatgaaaacaacatt
ggtctttgggatgttctcactaacattagttcatacattccgggcagagttgctaatgcc
gtaattgattttgttagcttaattaagcgtttcaaaatagatattgaaaacaaagatgcg
tttgaagcggccaatcttatagccaaaggatctggcatacttaaagcactttatgaagat
aaaacggtagaaggacttagccggtatgaaaacgttcaagaacttctcaacgcggtaaag
gaatttgttgatgatcctgaaaaggaagacaaatcactaggctctttcttacaagaaata
gcgctaatcaccggagtggataatgacaaggatgatgacgatgacaaagtcaccatgatg
actatacacatggccaaaggacttgagtttaaaaatgtgtatattgtaggtatggaagag
gatcttttcccgtcgcaaatgatgctgagtagtagagcagatctggaagaagaaagacgt
cttttctatgtggcaattacaagagctgagcacaaactctacttgtcatatgctctgtca
cgctatcgtttcggtagattaaaaaactgtgaacctagccgatttattgatgaaatagat
ccttcgtttataaaagtaagcaaacggcatactaaggtagaatcaagaccttcttctgaa
ggtaatggagattttgccaaaagctttgttagcggtataaaaagaaccacatcttcacag
cccgtaaccagaaagtctaactataaagcaccgatggactttaaaccaagtgatacctcc
accctaaaagcaggcatgaaggtagaacatcctaaatttggctacggtaaagtgatggaa
atggacgaaagtggcgctaatcgcaaagccaaggtgcattttgacgactttggagaaaaa
actttattacttagttttgctaaattaagaatacactcaaattag
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