Fulvivirga maritima: LVD15_15785
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Entry
LVD15_15785 CDS
T09268
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fmm
Fulvivirga maritima
Brite
KEGG Orthology (KO) [BR:
fmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmm03032
]
LVD15_15785
03400 DNA repair and recombination proteins [BR:
fmm03400
]
LVD15_15785
Enzymes [BR:
fmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVD15_15785
DNA replication proteins [BR:
fmm03032
]
Prokaryotic type
DNA Topoisomerases
LVD15_15785
DNA repair and recombination proteins [BR:
fmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVD15_15785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UII24771
LinkDB
All DBs
Position
3708997..3710016
Genome browser
AA seq
339 aa
AA seq
DB search
MTDQKSNCPHGIHYIADDCPGFTRKKRGRGFSYYDCDGKKISDKNIIKRIQSLVIPPMWQ
DVWICEDESGHLQVTGYDQKGRKQYIYHPKWTEYQQKNKFNRLKEFGFKLPDIRRQLERD
IRKKGWPKQKILALIVMMLDEYYIRIGNKRYEQENKTYGLTTLRRKHINEKDGHLVISFK
AKSGKEREIDIGSKKLIRLIKATSELPGYEIFRYLDDSKQSHRLDSHDVNEYLVEIAGEY
FTAKDFRTWGGTMLALENYEESKKEVEENPRQKLETTIVKKVAAVLGNTVAVCREYYIHP
KVMDVLLKNSLGHYTKKNLGKLEDEKELSEAEKLVLKII
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcagaagagtaactgccctcatggcatccattatatagctgatgattgcccc
ggctttaccagaaagaaaaggggtagaggcttttcttattatgattgcgatggaaagaaa
attagtgacaaaaatataattaagaggatccagagcctggtaataccacctatgtggcaa
gatgtatggatctgtgaagatgaaagcggtcacttacaggtaacgggttatgaccagaaa
gggaggaagcagtacatctatcatcctaagtggaccgaataccaacagaagaataagttt
aaccgtctgaaggagtttggctttaagctccctgatataagaaggcagctggaaagggat
atccgaaagaaaggatggcctaagcaaaaaatcctagcgctgatagtgatgatgctggat
gaatactacatcagaattggcaataagcgctatgagcaggaaaataaaacctatggacta
accacgctgagaagaaagcatattaatgaaaaagatggccatttggttatcagctttaag
gcgaagagtggaaaagaaagagaaatagatatcggcagtaaaaagcttatcagactgatt
aaagcaacctcagaacttccgggctatgaaatcttcaggtatctggatgatagtaaacaa
agccatagattagattctcatgatgtaaatgaatacctggtggaaattgccggcgaatac
tttaccgccaaagatttcagaacctggggtggaactatgctggctcttgaaaattatgag
gaatcaaaaaaggaagtagaagaaaaccccaggcaaaagctggaaactaccatagtgaag
aaggtggccgctgtgttagggaatacagtggcggtatgtcgtgagtattacattcaccca
aaagtaatggatgtactgcttaaaaatagcttaggccactataccaaaaagaatttagga
aagcttgaagatgaaaaggaattatccgaagcagaaaagctggttctaaaaatcatttaa
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