Fulvivirga maritima: LVD15_19915
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Entry
LVD15_19915 CDS
T09268
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fmm
Fulvivirga maritima
Pathway
fmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVD15_19915 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmm03019
]
LVD15_19915 (pnp)
03016 Transfer RNA biogenesis [BR:
fmm03016
]
LVD15_19915 (pnp)
Enzymes [BR:
fmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LVD15_19915 (pnp)
Messenger RNA biogenesis [BR:
fmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LVD15_19915 (pnp)
Transfer RNA biogenesis [BR:
fmm03016
]
Prokaryotic type
tRNA degradation factors
LVD15_19915 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_2
ComR_TPR
KH_NusA_1st
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
UII25553
LinkDB
All DBs
Position
4731168..4733297
Genome browser
AA seq
709 aa
AA seq
DB search
MQLNVINKTISLPDGRSITIETGKLAKQADGSVVVRMGNTMLLATVVSKPEAGEGVDFLP
LSVDYQEKFASSGKIPGGFLKREGKLSDYEVLISRLVDRAIRPMFNDDYHADTQIAISLI
SGDPDALPDALAALAASSALMVSDIPFNGPISEVRVARVNGEFIVNPTMSQNAEADIDLI
VAATMDNILMVEGEMKQVSEDEMLEAIKVAHDAIKVQCEVQLELQEAVGKTQKREYSHEV
NDEALKAKMHDELYEKVYEIARTPRPKKERSEGFDEIFSAFVESLPEDEEIDSTMLSRYF
KSIKKEACRNLVLNERIRLDGRALNEVRPIWTEVNYLPSTHGSAVFTRGETQSLSTVTLG
TKMDEQLIDGAMYEGSNKFMLHYNFPAFSTGEVRPNRGPGRREVGHGNLAWRALKEVLPE
KNTYTIRVVSDILESNGSSSMATVCAGSLALMDAGIQIEAPVSGIAMGMISDSETGNFAI
LSDILGDEDHLGDMDFKVTGTEKGITATQMDIKVDGLPYEVLKQALEQARDGRLHILNEM
KKTISAPNTDLKPNAPRSEVLIIDKDMIGAVIGPGGKVIQEIQKETGATIVIEEIDNKGQ
VSVFAVNGDSMNEALKRIKAIVAQPEIGEVYDGKVKSIMPFGAFIEFMPGKDGLLHISEI
KWERVENMEGVMEVGEEVKVKLVDIDKKTGKFRLSRKVLLPKPEKKESK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaacgtaattaacaaaacaattagtttacccgatgggagatccataactata
gaaaccggtaaattagctaagcaggctgatggttccgtagtagtaagaatgggcaacaca
atgttgcttgctacggtggtttctaaacctgaagctggtgaaggcgttgacttcttacct
ttatcagtggattatcaagaaaaattcgcctcgtctggtaaaatacctggaggttttctt
aaaagagaaggaaaactatctgattatgaagtattaatcagccgtttggtagatagagcc
attagaccaatgtttaatgatgactaccatgctgatactcaaatcgcaatatcattaata
tcaggagatcctgatgctcttcctgatgctttagctgccctggctgcatcatctgcatta
atggtttctgatatccctttcaatggccctatttctgaagtaagagtagccagagtaaat
ggtgagtttatagtaaaccctaccatgagccaaaatgctgaagcagatatagatcttata
gtagccgctactatggataatatcttaatggtagaaggtgaaatgaaacaagtgtcagaa
gatgagatgcttgaggctattaaagtggcacacgatgccattaaggtacagtgtgaagtg
cagcttgaattacaagaagctgtgggtaaaacacaaaagagagaatatagtcatgaagtg
aatgatgaggctttaaaagctaaaatgcatgatgaactttatgaaaaagtatatgaaata
gcgagaacaccaagacctaagaaagaaagatctgaagggtttgatgaaatattcagcgct
ttcgtagaaagcctgcctgaagatgaggagatcgatagcactatgctttctcgttatttt
aaaagtattaaaaaggaagcttgtcgtaaccttgtgctaaacgagcgtattagattggat
ggcagagctcttaatgaggtaagacctatctggactgaagtgaattatcttccttctact
cacgggtcagctgtatttacaagaggtgaaactcagtcattaagtacagttactttaggt
actaaaatggatgagcagctaattgatggagctatgtacgaaggttctaacaaatttatg
ctgcattataacttccctgctttcagtacaggagaagtaagaccaaatagaggtccaggt
cgtagagaagtaggacatggaaaccttgcttggagagcgcttaaagaggttcttcctgag
aagaatacttatactattcgtgtggtttctgatatccttgaatctaacggttcttcatct
atggctacagtttgtgctggttcattagcgcttatggatgctggtatccaaatagaagct
cctgtatcaggtatagctatgggtatgatctctgacagcgaaacaggtaattttgccatt
ctttctgatattttaggagatgaagatcaccttggagatatggactttaaagtaacaggt
accgaaaaaggtattactgctactcaaatggatattaaagtagatggacttccttatgaa
gtactgaagcaagctttagagcaagccagagatggaagacttcacattcttaatgaaatg
aagaaaactatttctgctcctaatacagaccttaaacctaatgcacctcgttcagaagtg
ctcatcatcgataaagatatgatcggtgcggtaataggaccaggaggaaaagtaattcag
gagatccagaaagaaactggtgccactatagtaatagaggaaatagataacaaaggtcaa
gtgagtgtatttgctgtaaatggcgattctatgaacgaagccttgaagagaataaaagct
attgtagctcagcctgaaataggtgaggtttatgatggtaaagtgaaatctataatgcct
tttggcgcatttatcgaattcatgcccggaaaagacggactacttcacatctctgaaatt
aagtgggaaagagtagaaaatatggaaggagtaatggaagttggtgaagaagttaaggta
aaacttgttgatattgacaagaaaacgggtaaatttagattatctaggaaagtgcttttg
ccaaaaccagagaaaaaggagtctaaataa
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