Fulvivirga maritima: LVD15_25135
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Entry
LVD15_25135 CDS
T09268
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fmm
Fulvivirga maritima
Pathway
fmm03030
DNA replication
fmm03430
Mismatch repair
fmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVD15_25135 (dnaE)
03430 Mismatch repair
LVD15_25135 (dnaE)
03440 Homologous recombination
LVD15_25135 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmm03032
]
LVD15_25135 (dnaE)
03400 DNA repair and recombination proteins [BR:
fmm03400
]
LVD15_25135 (dnaE)
Enzymes [BR:
fmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVD15_25135 (dnaE)
DNA replication proteins [BR:
fmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVD15_25135 (dnaE)
DNA repair and recombination proteins [BR:
fmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVD15_25135 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
MCM10_OB
T2SSK
HHH_3
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
UII26541
LinkDB
All DBs
Position
6009526..6013773
Genome browser
AA seq
1415 aa
AA seq
DB search
MYIVFDTETTGLPHSYSAPITDLENWPRLVQLAWQLHDEKGNLLSNHNYIVKPEGFTIPY
NSEKVHGISTKRALEEGHDLKKVLDIFSEDLDKASIVVGHNIEFDNKIVGTEYVRTSNQP
KGEELQEKEKIDTSEVSKEYCNLRGGIGGKLKSPKLIELHEKLFGVGFGDAHDAAYDVDA
TAKCFFGLITEKVVPTINDLPVEEVVYEAPKLDEANFAKTEKKSTVTHGGDKAAAQKIGH
PFVHLHVHTQFSVLQAVPDIKGLIAKAKEYNMPAVALTDLGNMFGGFKFVREAIANDIKP
IIGCEFFVAEERTKLKFTKDNPDKRFNQVLIAKNKAGYHNLAKLSSMAYMEGLYGIYPRV
DKDLIKQYSGDVIALTGGLQCEIPSLILNVGEHQAEEAFLWYLEVFKDDFYIELLRHGNR
PGQGLEEENRVNEVLLDFARKYHVKVIAANDVYYINQKDSEAHDVLLCVKEGEMKSTPIG
RGRGFRFGFPNDQFYFKSQEEMKVIFSDLPEAIENLTELIDKIEVYKLDRDVLLPAFNIP
DEFKHPDDEKDGGKRGENAFLRHLTYEGANKRYPEITDDIRERLDFELQTIENTGYPGYF
LIVQDFTSKAREIGVSVGPGRGSAAGSAVAYCIGITNVDPIAYDLLFERFLNPDRVSLPD
IDIDFDDEGRERVIQYVIDKYGRNQVAQIITYGTMAAKSSIRDAARVMELSLAEANDLAK
LIPEKPGTSLDKAFKEVKELEEMRHGADLKAKVLNQAKILEGSVRSTGTHACGVIITPDD
ITKFIPVSTAKDSPMLITQFDNSVVENAGMLKMDFLGLKTLTIIKSAIANVKKRHGIEID
IDHISLEDEKTYQLYQKGETNGTFQFESPGMQKHLRALKPDKFEDLIAMNALYRPGPMEY
IPNFIARKHGEEEITYDIEDMSEYLAETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAM
GKKIFALLEKLKPKFVDGGKERGHDPKVLEKVWKDWEAFAAYAFNKSHSTCYSLVAYQTA
YLKAHYPAEYMAAVLTHNQSNIEKVTFFMEECRSQGIKVLGPHVNESAVNFAVNEEGEIR
FGLGAIKGSGEAAVEAIIEEREANGPFKDIFDFAERINLRTVNKKTFECLAMSGAFDCFE
EFHRRQYLQAPEGEQTLIEKVIKYANKMQMEAESSQASLFGGDSGIDTPKPKIPAMEPFG
EIEKLNIEKDVVGLYISGHPLDDFSFEIENFCNTELNQLNDLTQLQGKEVRIAGIVSSFA
HRTTKGGKPFGTLTMEDYNGNFTFFLFGDDYIKFKEYLMQGWFLYIQGNAMERRWGDKSL
EFKIRTIELLNDIRDKRTKGVVVNVNLEELNEKIILQLEGICEQFRGECTFHVNLLDTQE
NIAVELMSRKYKVNPSNEMIKEIKKIPELKCRVMV
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgtacatagtttttgataccgaaaccaccggtttacctcatagttatagcgcacccatt
accgacctggagaactggcccagactggtacaattggcctggcagctacacgatgaaaag
ggtaatctgctttctaaccataattacattgtaaagcctgagggttttacaattccatat
aactctgaaaaggttcacggtatctctaccaaaagagccttagaagaaggtcatgaccta
aaaaaggtactcgatattttctcggaagaccttgataaagccagtatagtagttggtcat
aacattgagtttgataacaaaattgtaggtacagaatatgtacgtaccagcaaccagcct
aaaggggaagaacttcaggaaaaagagaaaatagatacctcagaagtatctaaagaatac
tgcaacctacgaggtggtattggaggtaaactcaaatctcccaagctgatagagctgcac
gaaaagctctttggggtaggttttggagatgctcacgatgcggcatatgatgtggatgct
actgccaaatgtttctttggccttattactgaaaaagtagtacctaccatcaacgatcta
ccggtagaggaagtggtgtacgaagctcctaagctcgatgaagccaactttgccaaaaca
gaaaaaaaatctaccgttacccatggtggtgataaggcggcagctcagaagataggccat
ccttttgtgcacttgcacgtgcatacccagttctcggtactacaagctgtaccagacatt
aagggcctcatagctaaagccaaagaatacaatatgcctgcagtggcactcactgacctg
ggtaacatgtttgggggtttcaaattcgtaagagaggccatagctaatgacataaagcct
atcattggttgtgagtttttcgtagctgaagaaagaaccaagctaaaattcaccaaagac
aaccctgataagaggttcaatcaggtgctgatagctaaaaacaaggctggctatcataac
ctggccaagttgagctccatggcctacatggaagggctgtatggtatttacccaagggta
gacaaagaccttataaaacaatattccggagatgtaatcgcccttaccggtgggcttcaa
tgtgaaataccatcacttatcctgaacgtaggtgagcaccaggccgaagaagctttttta
tggtatctggaagtatttaaagatgatttttatatagaattactgcgccatggtaataga
cctggacagggtctggaagaagaaaaccgtgtaaacgaagttctgctagattttgcccgc
aaataccacgtaaaagtaattgccgctaatgatgtttactacatcaaccaaaaagactct
gaagcacacgatgtactgctttgtgtgaaagaaggcgaaatgaaatctacacctatcggt
cgtggccgtggtttcagatttggtttccctaatgatcagttctacttcaagtctcaggaa
gagatgaaagtcatattcagtgacctccctgaagccatagagaacctgactgagctaatt
gataaaatagaagtctacaagctggatagagatgtgcttcttcctgccttcaacatccct
gatgagtttaaacacccagatgatgaaaaagacggtggcaaaagaggtgaaaatgccttt
ttgagacacctgacttatgaaggagccaataagcggtatcctgaaatcacagatgacata
cgtgagcgactagactttgagcttcagaccattgaaaacacaggttatcccggttatttc
cttattgtacaggatttcaccagtaaagcccgggaaataggcgtttcagtaggtcctgga
aggggatcagccgcaggttcggcagtagcctattgtataggtattaccaatgtagacccc
attgcttatgacctactttttgagagattcctaaacccggacagggtgtcacttcccgat
attgatattgactttgatgatgaaggtcgggaaagggtaatacagtacgtaattgacaaa
tatggtcgtaatcaggtagctcagatcattacttatggtaccatggccgccaagtcatcc
atcagggatgctgcccgggttatggagctttctttggcggaagccaatgacctggctaag
cttattcctgaaaagccaggcacatcgctagacaaagcctttaaagaagtaaaggagctg
gaagaaatgaggcatggcgcagacctgaaagccaaagtactcaaccaggctaaaattctg
gaaggctccgtaagaagtaccggtacacacgcctgcggggtaatcatcacccctgatgat
atcactaagtttataccggtatctacagccaaggattctcctatgcttatcacccagttt
gataacagcgtagtagagaatgcaggtatgcttaagatggactttttggggcttaaaacc
cttaccatcattaaatcggccattgctaatgttaaaaagagacatggcattgagatcgat
attgatcatatctcattagaagatgaaaaaacttaccagctctatcaaaaaggagagaca
aacggtacattccagtttgaatctcctggtatgcagaagcaccttcgcgcactgaagccg
gataagtttgaagaccttatagccatgaacgccctgtacagaccagggccgatggaatat
atacctaacttcattgccagaaagcatggcgaagaagaaattacttatgacatagaagac
atgtctgagtacctggcagaaacctatggtattaccgtatatcaggagcaagtgatgctt
ctgagtcagaagctggccggcttctctaaaggtgatgcggacgttctgcgtaaagcgatg
ggtaagaagatattcgctttactggaaaaactaaaacctaagtttgtagatggaggtaag
gaaagaggtcatgatcctaaagtactggaaaaagtatggaaagactgggaagcatttgcc
gcctacgcctttaacaaatctcactctacttgttactcactggtagcctatcaaacggcc
tacctaaaagcccactaccctgccgaatacatggcagccgtacttacacacaaccagagt
aacattgaaaaggtgactttcttcatggaagagtgtcgtagccaaggcataaaagtgctt
gggccacacgtaaatgagtcagcagtaaactttgccgtaaacgaagaaggtgaaattcgt
ttcggactgggtgctattaaaggtagtggtgaagcagccgttgaagcgattatagaagaa
agagaagccaatggcccttttaaagatatctttgactttgccgaaaggattaatcttaga
actgtaaacaaaaagacctttgaatgtctggccatgtccggagcattcgattgtttcgaa
gagtttcatagaagacaatacttacaagcacctgaaggagagcagactttaatagagaag
gtaatcaagtacgccaacaaaatgcagatggaagctgagagctctcaggccagccttttt
ggtggtgattcaggcatagatactcctaagcctaaaatacctgctatggagcctttcggc
gaaatagaaaaactcaatatcgaaaaagatgtagtagggctttacatttccgggcatccg
ctagatgatttttcttttgaaatagaaaacttttgtaataccgaactgaatcagctcaat
gatcttactcagctacaaggtaaggaagtaagaatagctggtattgtttcttcttttgct
catagaactaccaaaggtggcaaacctttcggcaccttaactatggaagattacaatggt
aactttaccttcttcctatttggtgatgactatattaagtttaaagaatacctgatgcaa
ggttggtttctctacattcagggtaatgccatggagcgaagatggggagataaaagtctg
gagttcaaaataagaaccatagagctacttaatgatattagagacaaaagaaccaaaggc
gtagtagttaatgtgaatctggaagagctcaatgaaaagattattttacagctagaaggt
atttgcgaacaatttagaggagaatgcaccttccacgttaacttacttgatactcaggaa
aatatagccgtagaactgatgtctagaaagtacaaagtgaaccctagcaatgaaatgatc
aaagagatcaagaaaataccggaactaaaatgccgtgtaatggtgtaa
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