Fusobacterium mortiferum: C4N19_01755
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Entry
C4N19_01755 CDS
T05444
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fmo
Fusobacterium mortiferum
Pathway
fmo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fmo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C4N19_01755 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmo03021
]
C4N19_01755 (rpoC)
03400 DNA repair and recombination proteins [BR:
fmo03400
]
C4N19_01755 (rpoC)
Enzymes [BR:
fmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C4N19_01755 (rpoC)
Transcription machinery [BR:
fmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C4N19_01755 (rpoC)
DNA repair and recombination proteins [BR:
fmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C4N19_01755 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
RPOC_hybrid
Peptidase_S24
Motif
Other DBs
NCBI-ProteinID:
AVQ17922
LinkDB
All DBs
Position
complement(347268..351230)
Genome browser
AA seq
1320 aa
AA seq
DB search
MGIRSFEKIRIRLASPEKIEEWSHGEVTKPETINYRTLNPESDGLFCEKIFGPTKDWECA
CGKYKRMRYKGLVCEKCGVEVTRSKVRRERMGHISLAAPVSHIWYSKGTPNKMSLIIGLS
PKELESVLYFARYVVTETGESNLKEGKILTEKEYKLYKQLYGNRFEALMGAEAILKLLEK
INLEELRVELEKELDDVSSSQKRKKVVKRLKIVRDFIASNNKPEWMILKNVPVIPADLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKKLLEIKAPEIVVKNEKRMLQEAVDALIDNGR
RGKPVVAQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPSLKMNQCGIPKK
MALELYKPFIMRELVKRELASNIKTAKKLVEEADDKVWDVIEDVIQDHPVLLNRAPTLHR
LSIQAFEPVLIEGKAIRLHPLVCSAFNADFDGDQMAVHLMLSPEAIMEAKLLMLAPNNII
SPSNGEPIAVPSQDMVMGCFYMTKERPGSKGEGKAFSNIAQALTAYHNGVLDTHAMIKVR
INGEMIETTPGRLMFNELLPEVDKQYNQTFGKSQLKKLIAKLYDEHGFTETAELINKIKD
FGYHYGAMAGVSVGIEDLEIPAAKKDILAKADEQVAQIEADYKAGKIINEERYRKTITVW
SEATDAVTKAMMNGLDQFNPVYMMANSGARGNISQMRQLAAMRGNMADTQGRIIEVPIKA
NFREGLTVLEFFMSSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNAEDCGTHQGIE
VGELISEGKVIEELKERINGRVLAEDLVYEGEVIAPRNTLIGKELIKKIDELGIRKVKIR
SPLTCALEKGVCRKCYGMDLSNHKEILLGEAVGVIAAQSIGEPGTQLTMRTFHTGGVATA
AAVVSGVRAENSGKVAYRDVKILVNEENGDEIVVSQSAKLIIGNYDYEIPSGSILKVKEG
QQVEIGETLVTFDPFHIPIIADQDGRIEYRELYVKENYDEKYDVTEFMAIKPVESGDINP
RVVVFDAEGNTKGSYTIPFGAYLMVREGEEIKKGQIIAKIIKEGAGTKDITGGLPRVQEL
FEARNPKGKAMLTEIEGKVEVTGKKKKGMRVILVKSVSDSSDYKEYLVPVGERLVVTDGM
LVKAGDKITEGAISPFDVLNIKGLVAAEQFILESVQQVYRDQGVTVNDKHIEIIVKQMFK
KVRIVDSGASLFLEDEVVEKRVVELENEKLQAEGKAIIKYEPIIQGITKAAVNTGSFISA
ASFQETTKVLSNAAIEGKVDFLEGLKENVIIGKKIPAGTGFSAYKKIKAKVIEEDLMEQE
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgggaattagaagttttgagaaaataagaattagattagcatctcctgagaaaattgaa
gaatggtctcacggagaggttacaaaacctgaaacaataaactatagaactttaaatcca
gaaagtgatggacttttctgtgaaaaaatattcggaccaactaaagattgggaatgtgca
tgtggaaagtataaaagaatgagatataaaggtctagtttgtgaaaaatgtggggtagaa
gtaactagatctaaggtaagaagagagagaatgggacacatttctctagctgcaccagtt
tctcatatttggtattctaaagggacaccaaataaaatgtcacttataataggactatct
ccaaaagaattagaatcagtactatattttgctagatatgtagttactgaaactggagaa
agtaatttaaaagaaggaaaaatcttaactgaaaaagaatataaattatataagcaatta
tatggaaatagatttgaagctttaatgggagctgaggctattttaaaacttcttgagaaa
atcaatcttgaagagttaagagtagagttagaaaaagagttagatgatgtaagttcatct
caaaagagaaagaaagttgttaagagattaaaaatagtaagagattttatagcttctaac
aacaaacctgaatggatgatacttaaaaatgttccagtaataccagctgatttaagacca
atggtacaattagatggaggaagatttgcaacttctgacttaaatgatttatatagaaga
gttatcaatagaaataacagacttaaaaaattattagaaataaaagcacctgaaatagtt
gttaaaaacgaaaaaagaatgcttcaagaagcagtagatgctttaatagataatggaaga
agaggaaaaccagtagttgctcaaaataacagagagttaaaatctctttctgatatgtta
aaaggaaaacaaggaagatttagacaaaatctacttggaaaaagggttgactactcagca
agatcggttatcgttgtaggaccatcattaaaaatgaatcaatgtggaattcctaagaaa
atggctcttgagttatataaacctttcattatgagagagttagtaaaaagagagctagct
tctaacataaaaacagctaagaaattagttgaagaagcagatgataaagtatgggatgta
atcgaggatgtaattcaagatcacccagtactacttaacagagctccgactctacacaga
ctatctattcaagcatttgaaccagtattaatagaaggaaaagcaattagacttcatcca
ttagtatgttctgcattcaacgctgacttcgatggagaccaaatggcagttcacttaatg
ctatctccagaagctataatggaagcaaaactattaatgttagctccaaataatattatt
tctccatcaaatggagagccaatagcagttccatctcaagacatggttatgggatgtttc
tatatgactaaagaaagaccaggttctaaaggagaaggaaaagcattctctaatatagct
caagctttaactgcttatcataatggagtattagatactcatgctatgattaaagtaaga
ataaatggtgaaatgatagaaactactccaggaagattaatgtttaatgaattattacct
gaagtagataaacaatataaccaaacttttggtaaatctcaattaaagaaacttattgct
aagttatatgatgagcatggatttactgaaacagctgaattaatcaacaagattaaagat
tttggataccactatggagctatggcaggagtatcagttggtatagaagaccttgaaatt
ccagcagctaagaaagatatcctagcaaaagcagatgagcaagtagcacaaatcgaagct
gattataaagcaggaaaaattattaacgaagaaagatatagaaaaacaatcactgtatgg
tctgaagcaactgatgcagtcactaaagcaatgatgaatggactagatcaattcaaccca
gtttacatgatggcgaactcaggagccagaggtaacatttctcagatgagacagttagcg
gcaatgagaggaaacatggccgatacacaaggaagaatcatcgaggtacctatcaaagct
aacttccgtgaaggactaacagtattagagttctttatgtcatcacacggagctagaaaa
ggactagcagatactgccctaagaactgctgactcaggatacttaacaagaagacttgtt
gatatatcacatgaagttatagttaatgcagaagattgtggaactcatcaaggaattgaa
gtaggagaattaatctctgaaggtaaggtaattgaagagttaaaagaaagaataaacgga
agagttcttgcagaagatttagtatatgaaggagaagtaatagctccaagaaatacttta
attggaaaagaactaattaagaaaatagatgaattaggaattagaaaagttaagataaga
tctccattaacttgtgctcttgaaaaaggagtatgtagaaaatgttatggaatggattta
tctaaccataaagagatattacttggagaagcggttggagttattgcagctcaatcaatc
ggagaaccaggtactcagcttacaatgagaacattccatactggaggagttgcaacagca
gcagcagtagtaagtggagttagagctgaaaattcaggtaaggtagcttatagagacgtt
aagatactagtaaatgaggaaaatggagacgaaatagtagttagtcaatctgctaaatta
attataggaaactatgattatgagattccatcaggttctatcttaaaagtaaaagaggga
caacaagttgaaattggagaaacattagttacattcgacccattccatatccctattatt
gctgaccaagatggaagaattgagtatagagaactttatgtaaaagaaaactatgacgaa
aaatatgatgttacagaatttatggcaattaaacctgtagaatctggagatatcaaccca
agagttgtggtatttgatgctgaaggaaatacaaaaggaagctatactatcccattcgga
gcttacttaatggtaagggaaggggaagagattaaaaaaggacaaatcattgctaaaatc
attaaagagggagcaggaacaaaagacatcactggaggtcttccaagagttcaagagcta
tttgaagctagaaatcctaaaggaaaagcaatgcttactgaaatagaaggtaaggtagaa
gtaactggtaagaagaagaaaggtatgagagtaatcttagttaaatcagtttctgattca
agtgattataaagagtacttagtaccagttggagagcgtctagttgttactgatggaatg
cttgtaaaagctggagataagataacagaaggagctatttctccatttgacgttctaaat
attaaaggacttgtagcagctgagcagtttatcctagaatctgtacaacaagtgtataga
gaccaaggagttactgtaaatgataaacacattgagattatcgttaaacagatgtttaag
aaagtaagaatagttgattcaggagcatctttattcttagaggatgaagttgtagaaaag
agagtagtagagttagaaaacgaaaaacttcaagctgaaggaaaagctataatcaaatat
gaaccaattattcaaggtattactaaagcagctgttaatacaggaagtttcatatcagca
gcttcattccaagaaactactaaagttctttcaaatgcagctattgaaggaaaagttgac
ttcttagaaggattaaaagaaaacgtaattatcggtaagaagataccagctggaactgga
tttagtgcttataaaaagataaaagcaaaagttatagaagaagatttaatggaacaagag
taa
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integrated database retrieval system
