Fusobacterium mortiferum: C4N19_01840
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Entry
C4N19_01840 CDS
T05444
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fmo
Fusobacterium mortiferum
Pathway
fmo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fmo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C4N19_01840 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmo03021
]
C4N19_01840 (rpoD)
Transcription machinery [BR:
fmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4N19_01840 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
AVQ17932
UniProt:
A0ABN5J601
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All DBs
Position
complement(366395..367741)
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AA seq
448 aa
AA seq
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MREFIKNEKVLALVRKAMENKCITYEEINDGLKDDFPVDKIEQLITGMMDQGIEIIRQAD
IDKNKKIAKEIKTKEAKAKKTKESTPKKAAKKKEKEELEEENFDEDSFDDFKDEDIDLFE
KDDFLDDDDFDDVLDGKLDDFDDDFDHFNPDDLEDIGDDEYISDDLFTLSGDMKVDEPIK
MYLREIGQIPLLSHDEELEYAKRALEGDEWASQQLIEANLRLVVSIAKKHTNRGLKLLDL
IQEGNIGLMKAVEKFEYTKGYKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETINKIK
KEARIYLQETGKDATPEVLAERLGMEVEKVKAIQEMNQDPISLETPVGSEEDSELGDFVE
DNKMLNPYELTNRSLLREQLDGVLNSLSSREEKVLRYRYGLDDGSPKTLEEVGKIFKVTR
ERIRQIEVKALRKLRHPSRRKKLEDFKV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtttataaaaaatgaaaaggttctagccttagttagaaaagctatggaaaac
aagtgcatcacttatgaagagattaatgatggacttaaagatgattttccagttgataaa
atagaacaattaataactggaatgatggaccaaggaattgagataataagacaagcagat
attgataaaaacaaaaaaatagctaaagaaataaaaactaaagaagcaaaagctaaaaaa
acaaaagaatcaactcctaaaaaagcagctaagaaaaaagaaaaagaggaattggaagaa
gaaaattttgatgaagatagttttgatgacttcaaagatgaagatatagacctttttgaa
aaagatgattttttagatgatgatgattttgatgatgttttagatggaaaattggatgat
tttgatgatgactttgatcattttaatcctgatgatttagaagatattggtgatgatgaa
tatataagtgatgatttatttactctttctggagatatgaaagtggatgagcctataaaa
atgtatttacgtgaaataggacaaattcctttattaagtcatgatgaagagttagaatat
gctaaaagagccttagaaggagatgaatgggcaagtcaacaactaatagaagctaactta
agactagttgtaagtattgctaaaaaacatacaaacagagggctaaaactacttgattta
atacaagaggggaatataggacttatgaaagcagttgagaagtttgaatatacaaaggga
tataaattttcaacatatgcaacttggtggataagacaagctataacaagagctattgca
gaccaaggaagaactataagaattcctgttcatatgatagaaacaatcaataaaattaag
aaagaagctagaatataccttcaagaaacaggaaaagatgctacaccagaagtactagct
gaaagacttggaatggaggttgaaaaggtaaaagctattcaagaaatgaaccaagatccg
atctcattagagactccggtaggtagtgaggaagatagtgaattaggagatttcgtagag
gacaataaaatgttaaacccatatgaattaactaatagatcactattaagagaacaatta
gatggtgtactaaatagtttaagtagtagagaggaaaaagttttaagatatagatatggt
ttagatgatggttcacctaaaacactagaagaagtaggaaaaattttcaaagtaacaaga
gagagaataagacagatagaagtaaaagctcttagaaaattaagacatccaagtagaaga
aaaaaattagaagattttaaagtataa
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