Fusobacterium mortiferum: C4N19_01975
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Entry
C4N19_01975 CDS
T05444
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fmo
Fusobacterium mortiferum
Pathway
fmo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fmo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C4N19_01975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmo03021
]
C4N19_01975
03400 DNA repair and recombination proteins [BR:
fmo03400
]
C4N19_01975
Enzymes [BR:
fmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C4N19_01975
Transcription machinery [BR:
fmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C4N19_01975
DNA repair and recombination proteins [BR:
fmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C4N19_01975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AVQ17955
LinkDB
All DBs
Position
complement(397334..398311)
Genome browser
AA seq
325 aa
AA seq
DB search
MLKIEKHARGINITEVKENEFKGQYIVEPLYRGYGHTVGNALRRVLLSSIPGAAIKGVRI
NGVLSEFSVMEGVKEAVTEIILNIKEIVVKAETSGERKMTLSVKGPKTVTAADIIPDVGI
EIVNPEQVICTITTDRELDMEFLVDTGEGFVVSEDIERKDWPVDYIAVDAIYTPIRKVSY
TIQDTMVGRMTDFDKLTLEIETDGSIEIRDALSYAVELLKLHFDPFLELGNKMENLRAEV
EDEEEDSTTHSKDDNILNTKIEELDLTVRSFNCLKKAGIEEVSQLAKLSLNELLKIKNLG
RKSLDEILEKMKELGYDLTQNGSPE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagattgagaaacatgcaaggggtatcaatataactgaagtaaaagagaatgaa
tttaaaggtcaatacatagttgagcctttatatagaggttatgggcatactgttggtaat
gctttgagaagagttttactttcgtctatcccaggagctgctattaaaggtgtgagaatt
aacggtgtattaagtgaattctctgttatggaaggagtaaaagaagctgtaactgaaatt
atcctaaacataaaagaaatagttgttaaagctgaaactagtggtgaaagaaaaatgact
ctttctgttaaaggacctaagacagtaactgcagctgatataatacctgatgtaggaata
gaaatagtaaatcctgaacaagttatttgtacaataactacagatagagaacttgacatg
gaatttcttgtagatactggagaaggatttgttgtatcagaagatatcgaaagaaaagat
tggccagtagattatatagcagtagatgctatctatactccaattagaaaggtatcatat
actatccaagatacaatggttggtagaatgactgatttcgacaaattaactttagaaatc
gaaacagatggaagcatagaaataagagatgcattatcttatgcagttgagttgttaaaa
ttacacttcgatcctttcttagagttaggtaacaaaatggaaaacctaagagctgaagta
gaggatgaagaagaagattcaactactcactctaaagatgataatattctaaatactaag
atagaagagctagatttaacagttagatcatttaactgcttaaagaaagctggaatagaa
gaagtaagtcaattagcaaaattatcgcttaacgaacttctaaaaattaaaaatctagga
agaaaatctttagatgaaatcctagagaaaatgaaagaattaggatatgatctaactcaa
aatggatctcctgagtaa
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