Fusobacterium mortiferum: C4N19_11810
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Entry
C4N19_11810 CDS
T05444
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fmo
Fusobacterium mortiferum
Pathway
fmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4N19_11810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmo03019
]
C4N19_11810
03009 Ribosome biogenesis [BR:
fmo03009
]
C4N19_11810
Enzymes [BR:
fmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C4N19_11810
Messenger RNA biogenesis [BR:
fmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C4N19_11810
Ribosome biogenesis [BR:
fmo03009
]
Prokaryotic type
rRNA helicases
C4N19_11810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
AAA_30
ASTN1_2_fn3
Motif
Other DBs
NCBI-ProteinID:
AVQ19737
LinkDB
All DBs
Position
2369146..2370783
Genome browser
AA seq
545 aa
AA seq
DB search
MEKLEQFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAF
SLPILENFEPSKVIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL
KKGTDIIVGTPGRVIDLMERKLIKLQDLKYFILDEADEMLNMGFVEDIEKILEATNEDKR
MLFFSATMPNEIMKIAKNHMKDYEVLAVKARELTTDLTDQIYFEVHEKDKFEALCRIIDL
TRDFYGIVFCRTKNDANDLVGKLNDRGYDAEGLHGDISQNYREVTLKRFKAKKINVLVAT
DVAARGIDVNDLSHVINYSIPQEAESYVHRIGRTGRAGKEGTAITFITPQEYRRLLQIQR
IVKTEIRKERVPEIKDVIQAKKFRLMEELNNILAEGNYDNFKDFAKELLNGEQALDLVAA
LLKHAYDDILDENNYNEISEVKLEKSGKVRLFIALGRKNAMTPKKLVDYVIKKSKVDDRK
IKNVEVFENFSFMSVPFTEAEIILEAFQKDKNGKKPLVEKAKDKSNEDKSKEKKENSKRK
KKENK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattagaacaatttagagaattaggattgagtgagaaaacattaaaagctttg
gcaaagaaagggtatgaacagcctactcctatccaggcgttaacaattccagctctatta
aatggagataaggatataattgggcaagctcaaacaggaacaggaaaaactgctgctttc
tctcttcctatattagaaaattttgagccaagtaaagttatacaagcaatagttctagct
cctactagagaattagctctacaagtagctgaagagatgaatagtttagctcacggtaaa
aaaataagaattactcctgtatatggtgggcaatcaatagagtttcaaattagacaatta
aaaaaaggaactgatattattgttggtactcctggaagagtaattgacttaatggaaaga
aaacttatcaagttacaagatttaaaatattttatcttagatgaagcagatgaaatgtta
aatatgggatttgtagaggatattgaaaaaatattagaagctactaatgaagataagaga
atgttattcttttcagcaactatgccaaatgaaattatgaaaattgctaaaaatcatatg
aaagattatgaagttttagctgtaaaagctagagaattaactactgatttaactgatcaa
atatattttgaagtacatgaaaaagataagtttgaagctctttgtagaattattgattta
actagagatttctatggaattgttttctgtcgtacaaaaaatgatgccaatgacttagta
ggaaaattaaatgatagaggatatgatgctgaaggtctacatggagatatcagccaaaat
tatagagaggttactttaaaaagatttaaagctaaaaagataaatgtacttgtagcaact
gacgtagctgctagaggaattgatgtaaatgatttatctcatgttattaactactctata
ccacaagaagctgaaagctatgtacatagaataggaagaacaggaagagctggaaaagaa
ggaactgctatcacttttatcactccacaagagtatagaagattacttcaaattcaaaga
attgtaaaaactgagataagaaaagagagagttcctgaaataaaagatgtaatacaagct
aaaaaattcagacttatggaagaactaaataatattttagcagaaggaaattatgataat
tttaaagattttgcaaaggaacttctaaatggagaacaagctttggatttagttgctgct
ttattaaaacatgcttatgatgatatcttagatgagaataactacaatgaaatcagtgag
gttaagttagaaaaatctggtaaagtaagattatttattgcactaggtagaaaaaatgct
atgactcctaaaaaacttgtagactatgttataaaaaaatctaaagttgatgatagaaaa
attaaaaatgttgaggtttttgaaaacttctcatttatgtctgttccttttactgaagct
gaaattatattagaagctttccaaaaagataaaaatggtaaaaagcctcttgttgaaaaa
gctaaggataaatctaacgaagataaaagtaaggaaaaaaaggaaaattcaaaaagaaag
aaaaaagaaaataaatag
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