Fusobacterium mortiferum: C4N19_12200
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Entry
C4N19_12200 CDS
T05444
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fmo
Fusobacterium mortiferum
Pathway
fmo03410
Base excision repair
fmo03430
Mismatch repair
fmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4N19_12200 (recJ)
03430 Mismatch repair
C4N19_12200 (recJ)
03440 Homologous recombination
C4N19_12200 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmo03400
]
C4N19_12200 (recJ)
DNA repair and recombination proteins [BR:
fmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C4N19_12200 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C4N19_12200 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C4N19_12200 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2533
W2
Motif
Other DBs
NCBI-ProteinID:
AVQ19810
UniProt:
A0ABM6TZA7
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All DBs
Position
2458278..2460839
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AA seq
853 aa
AA seq
DB search
MRNTRWIYKENSFSQNTNLNIDRDILNLLYNRDIRDEEKIYKFINTSLDNIHSPLLLKDV
DRAVERILQAKENKEEVWIYGDYDVDGITSTSLCYLALSEIGITPRYYIPLRDEGYGLNK
EAMDYIKSQGGKVIITVDCGISAHPEIEYANSLGLEIIVTDHHEINNGNPPAYAVINPKR
EDNQFPFKYMAGVGTAFMLIYALFDKLEKKEELYKYLDIVAIGTVADIVPLLEENRIFTK
FGMEQLNKSHWLGISMLIKKIFEDYKTKKFNTYDIGFIIAPIFNAAGRLEDAKRAVELFI
EKDHRVCSEIINELLNNNTERKEIQEMILERALFKIENEKLFEDSVLVVAEEGFHHGVIG
IVASKILDRYYKPTIIMEIKPDERIATASCRSIEGFNMIEALNTMKELFVKYGGHAGAAG
FSIKIENINEFSKRINEYAKENIPESSLIKPVKLDITIPAYKISYDFIDKISLLEPFGFG
NPSPLFALNNCEISGVRPIGKEKNHTMFNVRKDNLEIRNCVWFSSDDVFNEMASISHADI
AFKLKLETFKDKYMYKMYVEDMQLPRKEENIYERYNSLYNTVFPIETVIYTRKKLENSDL
KLVYHDYEVDVTLNRNYLTTLDNQTAYLLLEMRKNYGYNFKVSIKDIILKEENYNVHLII
DRDYEFVSYSLKQGELFRDIKNFLLGDFNYNSIQKNILASVFKEKKNTLAVVEKGRGVNT
VIQTIGLYYKSLGEKILLITDEVPYKKTLSCVDIADDFQEGYSFYIVDKKIDFSILKNKK
SLIFSSENIELEGFNKVVDSYTIPENIIFMEEELISKKNIFSNILPITTRKNILTSLNKY
SVLYCSRDILLYL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatactagatggatatataaagaaaatagtttctctcaaaatactaatctcaac
attgatagagatattttaaatctgctatacaatagagatattagagatgaagagaaaata
tataaatttataaatacctctttagataatatacactccccacttctattaaaagatgtg
gatagagcagtagaaaggatattacaagctaaagaaaataaagaagaggtatggatatat
ggagattacgacgtagatggaattacctctacctctttgtgttatcttgctctatcagag
ataggaattacccctagatactatattcctctaagagatgaagggtatggactcaataaa
gaagctatggactatataaaatctcaagggggaaaggtaattatcactgtagactgtggt
atctctgctcatcctgagatagagtatgccaactctttaggactggagatcatagttact
gatcaccacgagattaataatggtaatcccccagcttatgctgtaatcaatcccaaaaga
gaggacaatcagtttccttttaaatatatggctggagtaggaacagcttttatgcttatc
tatgctctctttgataaactagaaaaaaaagaggagctatataaatatttagatattgtt
gcaataggtacagtagctgatatagtacctcttttagaagagaatagaatatttacaaaa
tttggaatggagcaacttaataaaagtcattggcttggaataagcatgcttataaaaaaa
atatttgaagattataagacaaaaaaatttaatacctatgatattgggtttattatagct
ccaatatttaatgctgctggaagattagaagatgctaaaagagctgtagaactatttata
gaaaaagaccatagagtatgtagtgagataatcaatgagcttctaaataataatactgaa
agaaaagagatacaggagatgattttagaaagagctctttttaaaatcgaaaatgaaaaa
ctttttgaagatagtgttttagtagtagcagaggaaggatttcaccatggagtaattgga
atagttgcctctaaaattttagatagatactataagcctactatcattatggaaataaaa
ccagatgagagaatagccactgcctcatgtagaagtatagagggatttaatatgatagaa
gctctcaatactatgaaagaactttttgtgaaatatggtggacatgctggagcagctgga
ttttcaatcaaaatagaaaatataaatgaattttctaaaagaataaatgagtatgctaaa
gaaaatattccagagtcatccttaataaaacctgtaaaattagatataactataccagcc
tataaaatctcctatgactttatagataaaatttctcttttagaaccttttggatttggt
aacccctctccactttttgctctaaataattgtgaaatatctggagtccgtcctattggt
aaagagaaaaaccatactatgtttaatgtgagaaaggataatcttgagataagaaattgt
gtttggtttagtagtgatgatgtttttaatgagatggcttcaatctcccatgctgatata
gcttttaaattaaaactagaaaccttcaaagataaatatatgtataaaatgtatgtggaa
gatatgcaacttcctagaaaagaggaaaatatctatgaaagatataactctctatacaat
acagtttttcctattgaaacagtaatatatactagaaaaaaattagaaaactctgattta
aaattagtctatcatgactatgaagtagatgttactctcaatagaaactatctgactaca
ctcgataatcaaactgcttatcttctactggagatgagaaaaaactatggatataatttt
aaagttagtattaaagatatcattcttaaagaggaaaattacaatgtacatcttataata
gatagagattatgaatttgtatcctactctctaaaacagggagaactctttagagatata
aaaaatttcctgcttggagattttaactataactctatacaaaaaaatattcttgcctct
gtattcaaagagaaaaaaaatactctagctgttgtagaaaaaggtagaggagtcaataca
gttatacaaactattggtttgtattataagagtttaggagaaaagattctccttataact
gatgaagttccttataaaaaaactttaagctgtgtggatatagctgatgattttcaagag
ggatactctttctatatagttgataaaaaaattgacttttcaatattaaaaaataaaaaa
tctcttattttctcctctgaaaatattgaactagagggatttaacaaggtagtagatagt
tatactattcctgagaatattatttttatggaagaagagttaatttctaagaaaaatatt
ttctctaatatacttcctataactactagaaaaaatattctcacttctttgaataaatac
tctgtactttattgtagtagagatatattattatatttgtaa
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