Fuerstiella marisgermanici: Fuma_02447
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Entry
Fuma_02447 CDS
T04678
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fmr
Fuerstiella marisgermanici
Pathway
fmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fuma_02447 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmr03019
]
Fuma_02447 (cshA)
03009 Ribosome biogenesis [BR:
fmr03009
]
Fuma_02447 (cshA)
Enzymes [BR:
fmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Fuma_02447 (cshA)
Messenger RNA biogenesis [BR:
fmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Fuma_02447 (cshA)
Ribosome biogenesis [BR:
fmr03009
]
Prokaryotic type
rRNA helicases
Fuma_02447 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APZ92835
UniProt:
A0A1P8WFI7
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All DBs
Position
3247379..3248572
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AA seq
397 aa
AA seq
DB search
MQNTTELTFEQLGLHPKTLKTLAQNGYETPSPIQAELIPLALTGRDCIGQARTGTGKTAA
FMLPTMERIDLAEPAVQVLALAPTRELSEQVMMEAKKLCGGRIKLGIGVGGRPIHLQIRD
IENGAQGIIGTPGRIIDLLRRGALNLDKLKVLILDEADRMLDIGFRPDIERIIKQCPKKR
QTLLLSATLPPPVEKLAQKYMTDPEMVDLSEDNVVVDTIEQYYVTVDENRKRSLLLRVLA
QEKPAQAIVFTRTKRGADKLLEVFSRRLKSDRIAAIHGDLPQRKRDRVIKDLRAGKLRLL
IATDVVGRGIDISGISHIINYDIPEFCDDYVHRVGRTGRLSSAENGRAITFVRLDQGGEL
TNIEMRINTVLPEYRVDGFEAYAPKERSQRTVRKFGA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaacaccacggaactcaccttcgaacaactcggtcttcatcctaaaacactcaaa
acgctcgcccaaaacggctacgaaacgcccagcccgattcaggcggaactcatcccactg
gctctgaccggccgcgactgcatcggccaggctcgcacaggcaccggaaaaacggccgcc
tttatgcttcctaccatggaacgcatcgacctggcggaaccggcggtgcaggtcttggcc
ctggcaccgactcgcgaattaagcgagcaggtaatgatggaagccaagaaactgtgtggc
ggacgcatcaaactgggaatcggcgtgggcggacggcccattcatctgcagatccgcgac
atcgaaaacggagctcagggaatcatcggaacgccgggccgaatcatcgacctgctgcgt
cgcggagctctaaacctggacaagctgaaggtactgatcctggacgaagccgaccgcatg
ctggacatcggtttccgtcccgacatcgaacgcatcatcaagcagtgccccaaaaaacgt
caaacgctgctgctgtcggccaccctgccgccacccgtcgaaaagctggctcagaagtac
atgaccgacccggagatggtcgacctgtctgaggacaatgtggttgttgacacgatcgag
caatactacgtgaccgtcgacgagaaccgaaaacgttcgctgctgctgcgagtcctcgcg
caggaaaaaccagctcaggcgattgtgtttacgcgaaccaagcgaggtgccgacaagctg
cttgaggtcttctcacgccgcctgaagtcggaccgcatcgccgccatccatggcgacctg
cctcaacgcaaacgagatcgcgtgattaaagatttgcgagctggcaagttgcgtctgctg
attgcgacagacgtggtaggccgcgggatcgacatcagtgggatctcacacatcatcaac
tatgacattcccgaattctgcgacgactacgttcaccgtgtcggccgcacgggaaggcta
tcttctgccgaaaacggccgcgcgattacgttcgtgcgactggatcagggtggcgagttg
accaacatcgaaatgcggatcaacaccgttctgccggaataccgcgtggatggcttcgaa
gcctacgctcccaaagaacgctcacagcgcacagtccgcaagttcggcgcttga
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