Fuerstiella marisgermanici: Fuma_04118
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Entry
Fuma_04118 CDS
T04678
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fmr
Fuerstiella marisgermanici
Pathway
fmr03420
Nucleotide excision repair
fmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Fuma_04118 (pcrA_1)
03430 Mismatch repair
Fuma_04118 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmr03400
]
Fuma_04118 (pcrA_1)
Enzymes [BR:
fmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Fuma_04118 (pcrA_1)
DNA repair and recombination proteins [BR:
fmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fuma_04118 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Fuma_04118 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APZ94486
UniProt:
A0A1P8WKC1
LinkDB
All DBs
Position
complement(5563569..5565623)
Genome browser
AA seq
684 aa
AA seq
DB search
MLNLSGLNPPQRQAVETLSGPLLVLAGAGTGKTRVITFRMANLIRHGIRPDRILSVTFTN
KASREMRERALKLLGSRVKAKPVVSTFHAYCVRVLREDITALGYPKGFVIYDRSDQESAA
RTALREIRVGDKAMKPGDLLNKISSWKMSGLTENQAGEYAEADFDALAAMAYRKYQKQLR
ASGAVDFDDLLLLTSRLFKEHPEILQKHQAKFDHVQVDEYQDTNGVQFSLVENLVQGHQN
ICVVGDDDQSIYGWRGAEVQHILNFGGHFANTKTIRLENNYRCTNRIVEYANRLVRHNRN
RHEKKLIAHKPDGSPVRILAFEDETQESENVVKEIAYLITELSVRPKDIAILFRTNEQPR
LFETEMRRLNVPYVLLGGQSFFDRKEIRDLLAYLKVLAAPRDEVSLLRIINTPARGIGAT
TTEKLVQLAVSQGKSLWEVVPEGIAAGIVPKQAQAALSDFRNLLVRFRDVMLEHPRDLAD
HVRRLLRAIDYNGEIDKQYKDETQAEQRKAVLEDLVNSIGQYVEKNKSPTLEGFLETTAL
MDRDDKSDKDSELADNAVRLMTLHSAKGLEFPRVYLVGMEENLLPHRRSVESDLEKDIAE
ERRLAYVGVTRAMDYLTLTRAKARMKWGKRRETVTSRFLFEMQKEPGETLNEEHVGGEED
ELFDASAPKQTLTSLFDADDNPPF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatctcagcggactcaacccgcctcaacgacaggccgtcgaaacactttccggg
ccgctgctggtgctggccggcgcgggaacggggaagacgcgcgtgatcacgtttcgtatg
gcgaacctgatcaggcacggcattcgccccgaccgcattttgtccgtcaccttcaccaac
aaggcgtcgcgcgaaatgcgcgaacgagctctgaaattactgggttcgcgggtgaaggcc
aagcccgtggtgtcgacgtttcacgcgtattgcgtgcgagtcctgcgtgaggatattacc
gcgttgggatatcccaaagggtttgtgatttacgaccgcagcgatcaggaatcggccgct
cgcacggcgttgcgagaaatccgggtcggcgacaaagcgatgaaacctggcgacctgctg
aacaaaatcagttcgtggaagatgtcgggcctgactgaaaaccaggcgggtgagtacgca
gaagcggacttcgatgcgctggcggccatggcgtatcgcaagtatcaaaagcaactgcga
gcgtcaggtgcggttgatttcgacgatttgctgctgttgaccagtcggctgtttaaggaa
catccggaaatcctgcagaagcatcaggcgaagtttgatcatgtgcaggtcgacgaatat
caggacacgaacggcgttcagtttagtcttgtcgaaaaccttgttcagggccaccagaac
atttgcgtggtcggcgacgacgatcaatccatctacggctggcgtggtgccgaagtgcag
cacatcctgaacttcggcgggcatttcgccaacacgaaaactattcgtctggaaaacaac
taccgctgcaccaatcgcattgtcgaatacgctaaccgtcttgtgaggcacaatcgcaat
cgacacgaaaagaagctgatcgctcataagcccgacggttcaccggtgcgaattctggcg
ttcgaagacgagactcaggaatccgaaaacgtcgtcaaggaaattgcgtatctgatcacc
gaactgagtgtccgtcccaaagacatcgccattctgttccggaccaacgaacagccacgg
ctgtttgaaacggagatgcgacgtctgaatgttccgtacgttctgctgggcgggcaatcg
tttttcgatcgcaaagaaatccgcgacctgctggcctatctaaaggtgctggcggcgccg
cgtgatgaagtgagtctgctgcgaatcatcaacacgccggcacgcggcatcggagcgacc
acgactgaaaagctggtccagttggcggtgtcgcagggcaagagtctctgggaagtcgtg
cccgaaggcatcgcggcggggatcgtgccgaagcaggctcaggctgctttaagcgatttc
agaaacctgctggttcggtttcgcgacgtgatgctggaacatccacgagacctcgccgac
cacgtgcgcaggcttctgagagcgatcgactacaacggagaaattgataaacagtacaaa
gatgagactcaggctgagcagcgtaaggcggtgctggaagacctggtgaattccattggc
caatacgtcgaaaaaaacaagtcgccgacgttggaagggtttttggaaaccacagcgctg
atggaccgcgacgataagtcggacaaggattctgaactggcggacaacgccgtgcgtttg
atgacgctgcactccgcgaaggggttggagtttcctcgcgtgtaccttgtcggcatggaa
gagaacctgctgcctcaccggcgcagcgtggaaagcgacctggaaaaagacatcgccgaa
gaacgccggctcgcgtacgtgggcgtgactcgagcaatggactacctcacactgactcgc
gcgaaagcacgcatgaagtggggcaagcgtcgcgaaacggtgacgtcgcggtttctgttc
gaaatgcaaaaggaacccggcgaaactctgaacgaagaacacgtcggcggcgaagaagat
gagctgttcgatgcgtcggcgcccaagcaaacgctcacgagtctgttcgacgccgacgac
aatccgccgttttag
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