Fuerstiella marisgermanici: Fuma_04551
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Entry
Fuma_04551 CDS
T04678
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fmr
Fuerstiella marisgermanici
Pathway
fmr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fmr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fuma_04551 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmr03021
]
Fuma_04551 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
fmr03400
]
Fuma_04551 (rpoA_1)
Enzymes [BR:
fmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fuma_04551 (rpoA_1)
Transcription machinery [BR:
fmr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fuma_04551 (rpoA_1)
DNA repair and recombination proteins [BR:
fmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fuma_04551 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_1
TPR_19
TPR_8
TPR_16
TPR_9
TPR_14
TPR_7
TPR_6
TPR_17
ANAPC3
TPR_12
ARM_TT21_N
HEAT_Nup120
TPR_CcmH_CycH
PknG_TPR
TPR_11
TPR_5
EST1-like_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
APZ94900
UniProt:
A0A1P8WLG8
LinkDB
All DBs
Position
complement(6061131..6062453)
Genome browser
AA seq
440 aa
AA seq
DB search
MTVANVMNIPELLNLNSPLTLDQVESLRAALVGHQASEVRQGFVELKQKIAGGDAPESAL
ARAGITAYLLSKHVEADGFLEQVTKDGVASYFHAQVLTSLDRHADAAQKFEQAGKNGYDQ
IDATLRQAGAIRASGSVDEAEQMLRSVAASAASRAEYSFQMGCIWADRGDALTAVEYFER
AVDMDPHHSRALFWLAAENSLRGNDEEAIRYYERSLSKPPYFIGALLNLGLLYEDRESYQ
AAAFCFKRILDYDPNHEQAILYLKDIEATQDMYYDEDQARQEARMKQLLGRPVTDFELSV
RSRNCLTAMDIQTLGDLTEISEQELLAGKNFGETSLLEIRELLAAHSLRIGLNLHKVHAR
DTFVDQSLTPEEQAILNRPISDLSLSVRSRKCMNRLAIQTIGQLTSRTPDELLASRNFGV
TSLNEIRLKLGEMGIKLRND
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtagctaacgtcatgaacattccagaacttcttaatctaaacagcccgctgaca
ttggatcaggtggaatcgctgcgagcggcgctggtcggtcaccaggcgagtgaagtgcgt
caagggtttgtcgaacttaagcagaagattgctggcggcgatgcgccggaatctgcattg
gcccgagcaggcattacagcctacctgctgtcgaaacacgtcgaagccgacgggtttctt
gagcaagtgacaaaagacggcgttgccagctattttcacgcacaggtactgacgtcgctg
gatcgacatgccgatgccgctcagaagtttgagcaggctggcaaaaacggatatgaccag
atcgacgcgactttgcgtcaggcaggggcaattcgagcgtccggcagtgttgatgaagca
gagcagatgcttcgcagtgtcgcagcatccgcagccagtcgagccgagtattcctttcag
atgggctgcatctgggctgatcgcggcgacgctctgacggccgtggaatattttgagcgt
gcggtcgacatggacccgcaccattctcgcgctctgttttggctggccgccgagaactca
cttcgcggcaacgacgaagaagcaattcgttattacgaacgaagtttgtccaagccacca
tactttatcggtgccctgctgaacctcgggttgttgtacgaagaccgcgaaagctaccaa
gcggccgcattctgcttcaaacggattctggactacgatcccaatcacgaacaagcgatt
ctgtacctgaaggacatcgaagccactcaggacatgtactacgatgaggatcaggctcga
caggaagctcgcatgaagcagcttctgggacgtcctgtgaccgacttcgaactgtccgtg
cgcagccgcaactgcctgacggcgatggacatccagacgctgggcgatttgactgagatc
agtgaacaggaattgctggccggcaaaaacttcggcgaaaccagccttctggaaattcgc
gaactgttggccgctcacagtcttcgtatcggcctgaatctgcacaaagtgcatgctcgg
gacacgtttgtggatcagagcctgacaccggaagagcaggcgattctgaatcgtccaatc
agcgatctcagcctgtcggttcgttctcgcaagtgcatgaatcgtctcgcgatccaaaca
attggacagctcacgtcacgcacaccagacgaactgctggccagtcgcaacttcggcgtg
acatcgctgaacgagatccgcttaaagctcggagaaatgggtatcaaactccgcaacgac
tga
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