Fuerstiella marisgermanici: Fuma_06586
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Entry
Fuma_06586 CDS
T04678
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fmr
Fuerstiella marisgermanici
Pathway
fmr03420
Nucleotide excision repair
fmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Fuma_06586 (pcrA_2)
03430 Mismatch repair
Fuma_06586 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmr03400
]
Fuma_06586 (pcrA_2)
Enzymes [BR:
fmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Fuma_06586 (pcrA_2)
DNA repair and recombination proteins [BR:
fmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fuma_06586 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Fuma_06586 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
APZ96912
UniProt:
A0A1P8WS72
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All DBs
Position
8723368..8725758
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AA seq
796 aa
AA seq
DB search
MTNLTEPQQQAVDHFEGPLMVLAGPGSGKTRVITHRIAKLLARGVAPNSILALTFTNKAA
REMAERVDSLLNGVRVEVSTFHRFCARLLRRFHDHVGLKNNFTILDSSDQVALVRAIMKD
VGFDTTTHDPRRILNRISKARNDLITAEDFRMQHEERVGDLLDAVVYEVFPEYERLLLHN
NCVDFDALLLHVVDMLSGNDELREYLDLQFRFVLVDEYQDTNLAQYRIVRALSQHCPNLC
ATGDPDQSIYGWRGARPENIVQFEQDFGGTKIVSLDQNFRSTASIVRCADQLISHNPRRH
RNALHTDNEEGPPVRMRVYSDGEMEANEIAAEIAELVNSGKRKYSDFAVFYRVNALSRSV
ETALSRHQVPFQVASGFSFYERAEVRDLIGYLRLIENSSDDVAFVRIVNRPARGIGDKTV
QRLTEYARQNGVSLLDAAAKAADIPSLTARSRKPLKGFSDLIHKLQKKAESGNVRKLLER
LIDEIDYFKLWKDENDEVDTDRKANIYELLRAAELYEDAQEDAEHPPSLQGFLELAGLTS
EADSVDEHKGAVTLMTMHAAKGLEFPVVFVLGVESGLIPHERAIRDGDPASFQEERRLLF
VAVTRAMEELNLTQTRQRDFRGVRRYTIASPFIPEMEMEVVAEDDQPAPQMRQPSALDEF
VIKAKQRYQAAQSVPTAPKIMSAADLEKKLAAMKAGSAPDDAAGAAGDKGIEADRLRPAS
FVVESIGQMEAPATSTDADSLFAAGRPVRHPRYGRGVVLEASEGGSRATVTVLFEADDRE
ETFVTAHCPLQPIGAG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacctcacagaaccgcagcagcaggccgtcgaccacttcgaaggtccgttaatg
gtactggccggaccggggtcgggtaaaactcgtgtcatcacgcatcgcatcgccaaactg
ctggcacgcggcgtcgcaccgaatagcattctggcgctgacgttcaccaacaaagcggct
cgcgaaatggcggagcgagtcgattcgctgctgaatggcgttcgcgtggaagtgagcacg
tttcatcggttttgtgcgaggctgctgagacgctttcatgatcatgtggggttgaagaac
aacttcacgattctggattcgtccgatcaggtggcgctggtgcgagccatcatgaaagac
gtgggcttcgatacaacgactcacgatccacgacgcattctgaaccgcatcagcaaggct
cggaatgatctgatcacggcggaagacttccgcatgcagcacgaagaacgtgttggcgat
ttgctggacgccgtcgtgtacgaagtctttccggaatacgaacgcctgttgctgcacaac
aactgcgttgacttcgacgctttgctgctgcacgtggtcgacatgcttagcggcaacgac
gaactgcgtgagtatcttgacctgcagtttcgctttgtgctggtcgacgaatatcaggac
accaatctggcgcaataccgcattgttcgagcactctcgcagcattgtccgaacctgtgt
gcgaccggcgatcctgatcagtcgatttatggctggcgaggtgctcgaccggaaaacatc
gtgcagtttgagcaggattttggcggcacgaagatcgtttcgctcgaccagaatttccgc
agcacggcgtcgattgtccgttgcgcggatcagttgatttcgcacaacccgcgacgacat
cgcaatgctctgcacacggacaacgaagaaggtccgcccgtgcggatgcgcgtgtattcg
gacggtgaaatggaagccaatgaaatcgcggctgagatcgcggagttggtgaacagcggg
aaacgaaagtattccgatttcgcagtgttctaccgcgtgaatgcgttgtcgcgttcggtg
gaaacggcgttgtcgcggcaccaggttccgtttcaggtggcgtcgggattcagcttttac
gaacgagctgaagtgcgggacctgatcgggtatttgcggctcatcgaaaactcgtccgac
gacgtggcattcgtgcgcattgtcaatcgcccggctcgcgggatcggtgataaaacggta
cagcgattgaccgaatacgcccgtcaaaacggtgtgtcgttgctggatgccgccgcgaag
gccgccgacattccgtccctgacggctcgcagccgcaagccgctgaagggattctctgac
ctgattcacaaactgcagaagaaagcggaaagcggaaacgttcgcaagctgctggaacgt
ctgatcgacgagatcgattatttcaagctgtggaaggatgagaacgacgaagttgacacc
gatcgcaaggccaacatctacgaacttcttcgagcagccgaactgtatgaggacgctcag
gaagacgccgaacatccgccatcgctgcaggggtttttggaactggcggggctcaccagc
gaagccgacagtgtggacgaacacaagggtgctgtcacactgatgacgatgcacgctgcc
aagggcctggagtttccggttgtgtttgtattgggtgtggagtcgggtttgattcctcac
gaacgagccatccgcgacggcgatccggccagttttcaggaagaacgtcgccttctgttt
gtggccgtcacgcgagcgatggaagagctgaatctgacgcaaacacgtcaacgcgatttt
cgcggcgtccgacgttacacgatagccagtccgtttattccggaaatggaaatggaagtc
gtcgccgaagacgatcaaccagcgccccaaatgcggcagccttccgcactcgatgaattc
gtgatcaaggcaaagcaacgataccaggcggctcaatcggtgcccacggctcccaaaatc
atgtcggcggctgatctggaaaagaagctggccgccatgaaggctggctcggctccggac
gacgctgccggggcggctggtgacaagggcatcgaagcggatcgccttcgtcccgcatcg
tttgttgtagaatcgatcggacaaatggaagctccggcgacttcgactgatgccgatagc
ttgttcgccgccggcagaccagttcggcatcctcgctacggtagaggcgtggtactggag
gcgtcggaaggcggcagtcgagcgaccgtgaccgtgctgtttgaggcggacgaccgcgaa
gaaaccttcgtcaccgcgcactgtccactgcagcccattggtgccgggtag
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