Fuerstiella marisgermanici: Fuma_06658
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Entry
Fuma_06658 CDS
T04678
Symbol
dnaE_2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fmr
Fuerstiella marisgermanici
Pathway
fmr03030
DNA replication
fmr03430
Mismatch repair
fmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fuma_06658 (dnaE_2)
03430 Mismatch repair
Fuma_06658 (dnaE_2)
03440 Homologous recombination
Fuma_06658 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmr03032
]
Fuma_06658 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
fmr03400
]
Fuma_06658 (dnaE_2)
Enzymes [BR:
fmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fuma_06658 (dnaE_2)
DNA replication proteins [BR:
fmr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Fuma_06658 (dnaE_2)
DNA repair and recombination proteins [BR:
fmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Fuma_06658 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
ADNP_N
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
APZ96982
UniProt:
A0A1P8WSD3
LinkDB
All DBs
Position
8814321..8817977
Genome browser
AA seq
1218 aa
AA seq
DB search
MIDINTDITEAPSGNRPFAHLHCHTHFSLLDGVNRIPELVNQVKKLGMNSIAMTDHGNLG
GAMEFYNTCKKGDVKPIIGYEAYVAPGRRTDRSATRQKEAQSHLTLLAMNQKGFDNLIKM
ASTAYLEGFHYKPRIDRELLEEFNEGIICLSGCASSELSKMLLAEKNDEAKQLCEWYTRV
FGDRFYMEIQDAGFEIQKQCLELTVDLANKMGLPLVATNDAHYLTRDDAKVQDVLLCVNT
RTTKDDPNRMKMSNDGLYICSPEEMYTTFSGLEEAVSMSQTIADRVDIELHDRKLYPVFR
PPENKTDIDYLKELCNERMYERYGDELTDAHWDRLKYELSVIEEKGYASYFLIVWDFVEF
ARKNGIPCGARGSACGAIVAFLLRLGDVCPLKYDLLFERFLDPSRNEPPDIDIDFCRDRR
QMVIDYTKETYGEMNVAQIGTYGTLKAKNAIRDVGRALNVPLPRVNELAKMIPDELNIKL
KDALEKSPDLKAAYDGDPVAQELLDYAISVEGLARSMGTHAAGVVVADVPLDTVVPLQKI
TGKKDIITQWDGPTIEDIGLLKMDFLGLRNLTILDKAVKNVQRSHPDFTLQYVQEHLEDK
KTFALLQRGETKGVFQLESGGMRDLLTKMKPDCFEDIIATSALYRPGPLEGGMVMEYVDV
KNGRKQPRKVHPVVDEVLEETYGVMVYQEQVMRILNRVGNVELASAYKCIKAISKKKQSI
IDSFHGEYIAGAEANGISTKLADELWNLIVAFAGYGFNKSHSTAYGLIAYETAYLKAHYP
VEFMAALLSCGMESSERIAEHVDDSRRQNIEVLPPDVNTSEVEFAVVGDKISFGMGAIKG
VGEAALEAMVAERQENGPFRDIFDLAERVDPKALNKSALEVLIKVGALDNLPGNRAQQLE
VVERAVQSAVQKAKDKASGQMNLFGGDDDEEEVGADGEVVINLPDVPDWPKPQKLQAEKD
CLGFYLTSHPLAQHSKRISRYAQTTNKQLADMDDGAIVTIAGMVGSIKIATAKKTNANGQ
NKYANFDLEDATGIIRCIAWPSDYDRFKELIKPENIVIVQGKVDRRGREPNIVANRIMTL
DQADKEFTTQVAIKFDRGLHSLDDVENVRKVLGRFPGATDVILVVDSVDSGAEAANGSSN
SSTLETQTAEGGTAVAEADTATATDASNRIRYILTTGKDCQVTVGPEFQQALKDAIGEDF
YELKAGKSSNGGGGSTGR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacatcaatacggacatcaccgaagcaccgtccggcaatcggccgtttgctcat
ttgcactgtcacacgcactttagtttgctggacggggtcaaccggattccggagctggtc
aatcaggtcaaaaagctgggcatgaattcgattgccatgaccgaccatggcaacctgggc
ggagccatggagttctacaacacgtgcaagaaaggcgacgttaaacccatcatcgggtac
gaagcctatgttgctccggggcggcgcaccgaccgcagcgcgactcggcaaaaagaggct
cagtcccacttaacgttgctggccatgaaccagaagggtttcgacaacctgatcaagatg
gcgtcgactgcgtacctggaaggcttccactacaagccgcgtattgacagggagcttctg
gaagaatttaacgaaggcatcatttgcctttccggctgcgcgtcttcggaactttcgaag
atgctgctggcggaaaaaaatgacgaagctaaacagctttgcgaatggtacacgcgagtc
ttcggcgaccgtttttacatggaaatccaggatgcgggctttgagattcagaagcagtgt
ctggaactcacggtcgatcttgccaacaaaatgggcctgcctctggttgccaccaatgac
gctcactatttgactcgggacgacgcgaaagttcaggacgttttgctgtgcgtgaacact
cgcacaaccaaagacgatccgaaccgcatgaagatgtccaacgatggcttgtacatctgc
agtccggaagaaatgtatacgacgttcagcgggctggaagaagccgtatcgatgtcgcag
accatcgcggatcgagtcgacattgaactgcacgaccgcaagctttaccccgttttccgg
ccgcccgaaaacaagacggacatcgactacctgaaggaactctgcaatgaacgcatgtat
gaacgctacggcgacgaactgacggatgctcattgggatcggctgaagtacgaactcagc
gtgatcgaagagaaaggctacgccagttactttttgatcgtgtgggactttgttgagttc
gctcggaagaatggcattccctgcggtgcccgaggttccgcgtgcggtgccatcgtcgcg
tttctgctgcgtctgggcgatgtgtgtcctttgaagtacgacctgctgttcgaacgattt
ctggaccccagccgtaacgaaccgcccgatatcgatatcgacttctgccgcgatcgtcgt
cagatggtgatcgactacaccaaagagacgtacggcgaaatgaacgtcgcccagatcggc
acgtacggcacgctaaaggccaagaatgccatccgcgatgttggccgagccctcaacgtg
ccgctgccgcgcgtgaatgagctggcgaagatgattcctgatgagctgaacatcaagctg
aaagacgctctggaaaaaagtcccgacctgaaagctgcgtacgatggcgatccggtggct
caggaactgcttgactatgccatttccgtagaggggctggctcgcagtatggggactcac
gcagcgggcgttgttgtggccgatgtgccgctggatacggtcgttcctctgcagaagatt
accggcaagaaggacattatcactcagtgggacggcccgacgatcgaagacatcggcctg
ctgaagatggactttttgggtctgagaaacctgaccattctggacaaagctgtaaagaac
gtgcagcggagtcacccggactttacgttgcagtatgttcaggagcacctggaggacaag
aagacgttcgcgttgctgcaacgcggcgaaaccaagggcgtgtttcagttggagtctggc
gggatgcgagacctgctgaccaagatgaagcccgactgttttgaagacatcatcgcgacg
tctgcgttgtatcgtcccggcccgctggaaggcggaatggtgatggaatacgtcgacgtg
aaaaacggtcgtaagcagccgcgtaaggtgcatccagtagtcgacgaggttttggaagaa
acctacggcgtgatggtgtaccaggaacaggtcatgcggattctaaaccgcgtcggcaac
gtcgaactggccagtgcgtacaaatgtattaaggccatcagtaagaagaaacagtcgatc
atcgacagtttccatggcgaatacattgcgggtgccgaagccaacggcatttctacaaaa
ctggccgacgaattgtggaacctgatcgttgccttcgctgggtacggtttcaataaatcg
cattccacggcctacggtttgatcgcttacgaaaccgcatatctgaaggctcactatccg
gtcgagtttatggcggcactgctaagctgcgggatggaaagcagcgaacgcattgcggag
cacgtcgacgattcgcgacgccagaacatcgaagtgttgcctccggatgtgaatacgtcg
gaagtggagttcgctgttgttggcgacaaaatttcgtttggtatgggggccatcaaaggc
gtgggcgaagccgccttggaagcgatggttgccgaacgccaggagaacggtccgttccga
gacatctttgatcttgcagaacgagtcgatccgaaagcactgaataagtcggcgttggaa
gtgctgatcaaagtcggtgcgttggataacctgcctggcaatcgagctcagcagttagaa
gtggttgaacgagcggtccagtcggccgtgcagaaggccaaagacaaggccagcggtcag
atgaacctgtttggcggcgatgacgacgaagaggaagtcggtgccgacggcgaagtcgtc
atcaatctgccggacgttcccgactggccgaagcctcagaaactgcaggccgaaaaagac
tgtcttggattctacctgacgtcgcacccactggctcagcattccaaacgcatcagcagg
tacgctcaaacgacaaacaagcagctcgccgacatggacgacggagcgattgtgacgatc
gccggcatggtcggttcgatcaagattgcgacagcgaaaaagaccaacgcgaacggccag
aataagtatgccaacttcgaccttgaagacgcgacgggcatcattcgctgcattgcgtgg
ccgtcggattacgatcggtttaaagaactgatcaagccggaaaatatcgtaatcgtgcag
gggaaggtggatcgtcgtgggcgagagcccaacatcgtggcgaatcgcatcatgacgctc
gatcaggcggataaagagttcacaactcaggttgcgattaagttcgatcgcggactgcat
tcgctggacgatgtggagaacgtgcgaaaagttctggggcggtttcccggcgccaccgat
gtgattctggtggtcgatagcgttgattcaggggcggaagctgcaaatggaagcagcaat
agctcgacactggaaactcagaccgcagagggcggcacggcggttgctgaagctgacaca
gccacggcgaccgatgcttccaatcgcattcgctacattctgaccacaggcaaagattgc
caggtgaccgtggggccggaattccagcaggcgttgaaagatgccatcggtgaggacttc
tacgaactgaaggccggtaagtcgtccaacggtggcggcggttctacggggcgttga
DBGET
integrated database retrieval system
