Fenollaria massiliensis: M1R53_04905
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Entry
M1R53_04905 CDS
T08130
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fms
Fenollaria massiliensis
Pathway
fms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1R53_04905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fms03019
]
M1R53_04905
03016 Transfer RNA biogenesis [BR:
fms03016
]
M1R53_04905
Enzymes [BR:
fms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M1R53_04905
Messenger RNA biogenesis [BR:
fms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M1R53_04905
Transfer RNA biogenesis [BR:
fms03016
]
Prokaryotic type
tRNA degradation factors
M1R53_04905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
SPATA25
S1_2
OB_RRP5_4th
ChrB_N
Motif
Other DBs
NCBI-ProteinID:
UQK58581
UniProt:
A0A9E7DIK6
LinkDB
All DBs
Position
complement(968963..971059)
Genome browser
AA seq
698 aa
AA seq
DB search
MQENFKTTLAGRPLEIETGKMCEQAGGSCLVKYGDTYVLVNATSTKAPREGVDFFPLSVD
YEEKFYSVGKIPGGYIKREGRPSEKAVLTSRLIDRPIRPLFPEGFFNDVQVIATVLSVDP
DNSPEIAAMIGSSVALCISDIPFNGPTAAVYVGLIDGEYVINPKQEEMEKSDINLCISGT
KDAIMMVESGSNEVSEDQMIKAILKGHEAIKEICEFEEEIIKKIGKEKYSFEKFEAKEEI
FNEIDKEFREDIKDSIFEADKIQRIENSESLKDTILNKYLEKYPEDQKSILKTIDDITSE
EFRKGILERNLRPDGRNTEQIRPLSAEVGLLPRAHGSGLFKRGQTQVLTIATLGSFGDSQ
SQDGLVEEGEKHYMHQYNFPPYSVGDVRPLRSPGRREIGHGALAERALVPVIPTLEEFPY
TIRLVSEVLSSNGSSSQASICGSTLALMDAGVPIKKPVAGIAMGLIKSDANTKILTDIQG
LEDHLGDMDFKVAGTKDGITAMQMDIKVQGIDEEIMKVALEQAKKARFEILDVITSAISE
PRKELSEYAPKIATIKIDPDKIRDVIGSGGKVINKIIEETGAKIDITDDGDVYISADTTE
GLNGAKKMIEDIVKEVEVGEVYFGKVNRITNFGAFVEVLNGKEGLLHISQISKDRVNKVE
DVLKLGDEIMVKVTSIDEQGRINLSRKALVENSDGESK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaattttaaaactaccttagcaggtagacctttagaaattgaaacaggaaag
atgtgcgagcaagctggtggctcttgcttagttaagtatggagatacttatgttttagtt
aatgcgacaagcacaaaagcaccaagagaaggggtagacttcttcccattaagtgttgat
tacgaagaaaaattttattctgttggcaagataccaggaggatatataaaaagagaggga
agaccttcagagaaagcagttttaacttcaaggctgattgatagaccaattagaccttta
tttcctgagggcttttttaatgatgtacaagtcatagcaacagtactttcagttgatccg
gacaatagtcctgaaattgctgctatgatcggttcatcagtagctttatgtatttctgat
ataccatttaacggaccaacagcagctgtttacgttggacttatagatggtgaatacgtt
atcaacccaaaacaagaagagatggaaaagtctgatataaacctatgtatttcaggcaca
aaggacgctatcatgatggtagaatcaggatcaaatgaagtttctgaagatcaaatgata
aaggctatactaaagggacacgaagctatcaaagaaatttgtgaatttgaagaagaaatt
atcaaaaagataggtaaagaaaaatattcatttgaaaaatttgaagcaaaagaagaaatt
tttaatgaaatcgataaagagtttagagaagacattaaagactctatatttgaagctgac
aagatccaaagaattgaaaacagcgaatcacttaaggatactatactaaataaatatctt
gaaaaatatccagaagatcaaaagagcatacttaaaactattgatgatatcactagcgaa
gagttcagaaaaggcatacttgaaagaaatttaagacctgacggaagaaatactgaacaa
atcagaccactttctgcagaagttggcttattacctagagctcatggatcaggattattc
aaaagaggtcaaactcaagttttaactatagctacacttggatcatttggcgacagtcaa
tcacaggacggcttggttgaagagggcgaaaaacactatatgcatcaatacaatttccct
ccatattcagttggagacgttagaccgcttagaagcccaggcagaagagagataggtcat
ggagcccttgccgaaagagctttagttccagttataccaacacttgaagagttcccatac
actataagacttgtatcagaagtactaagctcaaacggctcttcatcacaagcaagtata
tgcggttcaacacttgctcttatggatgctggtgtaccaattaaaaaaccagtagcaggt
attgctatgggacttattaaatcagatgcaaatacaaagatattaacagatattcaagga
cttgaagatcaccttggagatatggactttaaagtagctggtactaaagatggtatcaca
gctatgcaaatggatatcaaggttcaaggtatagatgaagagatcatgaaagtggctcta
gaacaagctaagaaagctagatttgaaatacttgatgtaattacatcagctattagtgaa
ccaagaaaagaattatctgaatatgcaccaaagattgcaacaatcaagatagatccagat
aagattagagatgttataggctcaggcggaaaggtaattaacaagattatcgaagaaact
ggtgctaagattgatataactgatgacggtgacgtatacatctcagctgatactactgaa
ggacttaacggtgctaagaagatgatagaagacatcgtcaaagaagttgaagtaggcgaa
gtttattttggtaaagttaatagaataactaattttggagcttttgttgaagtgttaaat
ggcaaagaaggtttattacacatttcacaaatttctaaagacagagtaaataaagttgaa
gatgtattaaagcttggcgatgaaatcatggttaaggttacatctattgatgaacaaggc
agaatcaatctttcaagaaaggccttggtagaaaattctgacggggaatcaaaataa
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