Fructilactobacillus myrtifloralis: M3M35_01545
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Entry
M3M35_01545 CDS
T08864
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fmt
Fructilactobacillus myrtifloralis
Pathway
fmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M3M35_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmt03019
]
M3M35_01545
03400 DNA repair and recombination proteins [BR:
fmt03400
]
M3M35_01545
Enzymes [BR:
fmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M35_01545
Messenger RNA biogenesis [BR:
fmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M3M35_01545
DNA repair and recombination proteins [BR:
fmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M3M35_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Death
PsaF
Motif
Other DBs
NCBI-ProteinID:
USS85376
UniProt:
A0ABY5BS10
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All DBs
Position
complement(295369..296781)
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AA seq
470 aa
AA seq
DB search
MDQLTQLLQNKFGFSRFRPGQRETLERLQHRQSVLAVLPTGAGKTLIYQLYGALLDRPVV
IVSPLLSLMTDQVERMQYGGEKRVVALNSQQSWTERQQTLAHLSQYRFIFISPEMLANQT
VLRELQQLDIGLFVIDEAHCISQWAVDFRPDYLDLGKYWRALGTPQLLLLTATASQRVQD
DIIKKLQAPNVQKLVWNVDRSNIFLAEQTLATETAKQDYLVKFVQQITGPGIIYFSSKKV
ANQMTAKLQAETDLQVAAYHADLDTAARFTIQHQFMDDELQLICATSAFGMGIDKANIRF
VVHYHLPQDLESYMQEIGRAGRDGHQSLALLLYVPGDEQLSLTLVQRSIPTEHELELFEQ
HQSATLNEQIRRLLQYYHDHNVDRTTLLQVFQAERKRKEQAILLMVRYALTTECRRTALL
SRFSSTKTADLTWCCDNDQPDWTVDQLGLAPTAPVAVPFRDWRQIIAELF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggatcagctaacgcaactgttacagaataaattcggtttttcccggtttcgtcccggc
cagcgggagacgcttgaacggctacaacaccggcaatcggtcttggccgttttgccgacg
ggagcgggcaaaaccttgatttaccagttgtacggtgcattgcttgaccgccccgtggtc
attgtttcgcctttattatcgctcatgaccgatcaagtagagcggatgcagtatgggggt
gagaaacgggtggtagcccttaattctcagcaaagttggacagaacggcaacaaacgctg
gcgcacctttcacagtaccgatttatcttcatttctcctgaaatgttagccaatcaaacg
gtgctgcgcgaactccagcagttagacatcggtctctttgtgattgatgaagcgcactgt
atttcccagtgggcggttgattttcgccccgactatttagaccttggcaaatactggcgg
gcgttaggcacgccacaactcttgttattgaccgcaacggcgtcccaacgagttcaggat
gatatcatcaagaaattacaggctcccaatgtgcaaaagctggtctggaacgttgatcgg
tcaaacatttttctagcggaacaaacgctggcaacggaaaccgctaagcaggactacctg
gtgaaattcgtgcaacaaattaccgggccggggattatttatttttccagcaaaaaggtt
gccaaccaaatgactgcgaaactccaggcagaaacggatctgcaggtggcggcctatcac
gctgatctagacaccgcggcccgctttacgattcaacaccagtttatggatgacgagctc
caactaatttgtgctacctccgcgtttggaatggggattgataaagcgaacatccggttt
gtagttcattaccacttaccccaggatttagaaagttacatgcaagaaattgggcgagct
ggtcgggatggacaccagagccttgctttactcctctatgttcccggcgacgaacagtta
agcttaacgctcgtgcaacgaagcattccaacggaacatgagttggaattatttgaacag
catcaatccgctactttgaatgagcagattcggcggttgctgcagtattatcatgatcac
aacgttgaccgaacgacgctgttacaggtttttcaagcggaacgaaagcgcaaggagcag
gccattttgctgatggtgcggtatgcactgaccaccgagtgtcggcgcacggcattgctc
agtcggttttctagtaccaaaaccgctgacttaacctggtgttgtgataatgatcaaccg
gactggacggttgatcagttagggttagcgcccactgcgccggtggccgttccattccgg
gattggcggcaaattatcgcggaattattttaa
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