Fructilactobacillus myrtifloralis: M3M35_01615
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Entry
M3M35_01615 CDS
T08864
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fmt
Fructilactobacillus myrtifloralis
Pathway
fmt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fmt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M3M35_01615 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmt03021
]
M3M35_01615 (rpoD)
Transcription machinery [BR:
fmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M3M35_01615 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
USS85389
UniProt:
A0ABY5BSP5
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All DBs
Position
complement(309767..310972)
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AA seq
401 aa
AA seq
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MAERKARKNAELKKATPEAKSTTAAKQERLNQDLKKEFDQDGYHKVYEALVKKYKKIGHV
TYATLESELQVPFDLKKKQMNELLEKVEDDGISIVDEHGEPDPRALEAAKKVTQKELKNA
SSSQGVKINDPVRMYLKEIGRVPLLTADQEVQLALRIEEGDEEAKQELAEANLRLVVSIA
KRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIR
IPVHMVETINKLIRVQRQLLQDLGREPLPIEIGAEMDMPTAKVRNILKISQEPVSLETPI
GEEDDSHLGDFIEDKEATSPEDHASYELLKEQLEGVLDTLTDREENVLRLRFGLDDGRTR
TLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgaaaagcacgtaaaaacgcagaattaaaaaaagcgactcccgaagcaaaa
agtaccaccgctgcaaagcaggaacggctgaatcaggatctgaaaaaagagtttgatcaa
gacgggtaccacaaggtttacgaagctttagtaaagaagtataaaaaaattgggcacgtc
acgtatgcaaccttggaatcagaactccaggttcccttcgatctgaagaaaaaacaaatg
aatgagttgttagaaaaggttgaagacgatgggattagcatcgttgacgagcacggagaa
ccggatccgcgagcgctagaagccgctaaaaaggttacccaaaaggaactgaagaatgcc
tcaagctcgcaaggggttaagatcaacgatcccgttcggatgtacttgaaagaaattgga
cgggtcccattgctaactgcggaccaagaagtgcagttggcccttcggatcgaagaaggg
gacgaggaagccaagcaagagctcgccgaagctaacttacgactggttgtttcgattgct
aaacggtacgttggtcggggcatgcagttcttagacttaattcaagaaggaaacatgggg
ctcatgaaggccgttgaaaaatttgattaccgcaaggggttcaaattctcaacgtacgct
acttggtggattcgccaggcgattacccgggcgattgctgatcaagctcgaacgattcgg
atcccggtccacatggttgagaccattaacaagttaattcgggtccaacggcagttactg
caagaccttggtcgcgaaccgctccccattgaaattggagcagaaatggacatgccaacc
gctaaggttcgtaacattctgaagatttctcaggaaccagtatcgttagaaacgccgatt
ggggaagaggatgactcccaccttggcgacttcatcgaagataaagaggctaccagtccc
gaagaccatgcttcgtatgagctattgaaagaacagttagaaggggtcttagataccctt
acggaccgagaggaaaatgtcttacgacttcggtttgggcttgacgatggtcggacccgg
acgttagaggaagtaggcaaggtctttggggtaacgcgagaacgaattcggcaaattgaa
gcaaaggcgttacgcaagttgcgacacccatctcgcagtaaacaattgaaagacttttta
gactaa
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