KEGG   Fructilactobacillus myrtifloralis: M3M35_02230
Entry
M3M35_02230       CDS       T08864                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
fmt  Fructilactobacillus myrtifloralis
Pathway
fmt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fmt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M3M35_02230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fmt03019]
    M3M35_02230
Messenger RNA biogenesis [BR:fmt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M3M35_02230
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: USS85504
UniProt: A0ABY5BPV4
LinkDB
Position
434351..436036
AA seq 561 aa
MSKLNVKNNETAIYGVGGLGEIGKNTYGVQFQDEIILIDAGIKFPESSQLGIDYVIPDYQ
YLVENQDKIKALVITHGHEDHIGGIPFILKAINVPVYAGPLALALIKGKLEEHGMLKQTE
LHAIDENTVLKFKKTSVSFFRTTHSIPDALGVAVHTPDGVIVETGDYKFDLTPVTNTPPD
LQTMAKLGEEGVLCLMADSTNAEKPVWTKSERYVSDSVRKIFKRVKGRIIFATFASNLSR
VMTAIDAAYQNGRKIAVFGRSMEAAVVNGRELGYIKVPDKAFVDANQLKSLPADKVMILC
TGSQGEQMAALSRIANGTHRQISIEPGDTVVLSSNPIPGNVLSVNRVVDELEEAGATVIK
GYANHIHTSGHGGQEEEKLMIRLMKPKFFVPIHGEYRMQKIHMGLAEQCGIPKDHCFILK
NGDVLALTKDSARMAGNFAAGDVYIDGNGVDTVTEQVIEDRQLLSEEGLVVVVATINLKD
KEIQSGPDLLSRGFVYMRESGELLDQGRKLVFRTIRRAMNNKNASEKTIKKAVVNELSNF
LYEKTERHPLVLPMLIMNNTK
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagtaaactaaacgtcaaaaacaacgaaacggcgatttatggcgttggtggtctaggt
gaaatcggaaaaaacacgtatggcgtgcaattccaagacgaaatcattctcattgatgcc
ggaattaagtttccggaaagcagccaactcgggattgattacgtgattccagattatcaa
tatctggtcgaaaaccaggataagattaaggccctggtcattacccacggtcacgaagac
catatcggtgggattccctttatcctcaaggctattaacgttccggtgtacgccggtccc
ctcgccctcgctttaattaaaggtaaattagaagagcatggcatgttaaaacaaaccgag
ttacatgccatcgatgaaaacaccgtcttaaagtttaaaaagaccagcgtctccttcttt
cgaaccacccactcaatccctgatgctctaggagttgcagttcacactcccgacggggta
atcgttgaaactggtgattataagtttgacctgacgccggtgaccaacaccccgcctgac
ttacaaacgatggccaagctcggtgaagaaggagtgctgtgcctgatggccgacagtacg
aacgccgaaaaaccagtgtggaccaagtccgaacgctacgttagtgattcggtccgcaaa
attttcaaacgggtgaaggggcggattatttttgcaacctttgcttcgaacctctcccgg
gtgatgacggcgattgacgcggcctaccaaaacggacgtaaaattgccgtctttggtcgg
agcatggaagctgccgttgtcaacggtcgggaactcggttacatcaaggttcctgacaag
gcctttgtcgatgctaaccaacttaagtccctaccggccgacaaggtcatgattctatgt
accggttctcaaggagaacaaatggctgccctatcccgaattgccaacggtacccaccgg
cagatctcaattgaacctggtgacaccgtagtcctttccagtaacccaatccccggaaac
gtcttaagcgtgaaccgagtggttgacgaactggaagaagcgggcgccactgttatcaag
gggtatgctaatcacattcacacttctggccacggtggccaagaagaagaaaaattgatg
attcgcctcatgaagccgaagttcttcgtcccgattcacggtgaataccggatgcagaaa
attcacatggggcttgccgaacaatgtgggattcccaaggatcactgctttatcttgaaa
aatggtgacgtgctggccctgactaaggacagtgcccggatggcaggtaactttgccgcg
ggggacgtttacattgatggtaatggtgtggatacagttaccgaacaggtaatcgaagac
cggcaactgctttctgaagaaggcctggtggtggtcgttgctaccattaatttaaaggac
aaggaaattcaatccggtcctgatctcctttcccggggcttcgtttacatgcgtgaatcc
ggcgaactgcttgatcaaggtcgcaaattggtctttcggaccattcggcgggcgatgaat
aacaaaaacgccagtgaaaaaacgattaaaaaggccgttgtcaacgagttatccaacttc
ctctacgaaaagacggaacgccacccgttggttctcccaatgctaattatgaataacacg
aagtaa

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