Fructilactobacillus myrtifloralis: M3M35_02865
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Entry
M3M35_02865 CDS
T08864
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fmt
Fructilactobacillus myrtifloralis
Brite
KEGG Orthology (KO) [BR:
fmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fmt03009
]
M3M35_02865 (rlmD)
Enzymes [BR:
fmt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
M3M35_02865 (rlmD)
Ribosome biogenesis [BR:
fmt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M3M35_02865 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Methyltransf_25
PrmA
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_11
TRM
Methyltransf_12
UPF0020
N6_N4_Mtase
Methyltransf_23
PCMT
Methyltransf_32
Methyltransf_4
DOT1
RrnaAD
TPMT
FtsJ
Methyltrans_SAM
TM1506
DREV
Motif
Other DBs
NCBI-ProteinID:
USS85599
LinkDB
All DBs
Position
complement(547276..548655)
Genome browser
AA seq
459 aa
AA seq
DB search
MSKNKQAPVTKNETLDVAVTDLTYEGMGVAKVDGGYPLFIEDALPGEQVTVKVIKVKRNF
AFAKLLETKQASPDRVTTVDRRLTQAGIAPLQHLSYAKQLEFKQHQIAELFQKAHLEQVQ
VAPTIGMDHPVQYRNKAQIPVREQHGQLETGFYRRHSHDLIPIEDFYIQDPAIDDAIVKV
RDVLRDFQIPAYNETTHQGVVRNIMVRYGKYSHELMVVLVINDRHLPRAAEITAAIEAAL
PNLDSLVVNVNQSTGNRLLGDKNTVLAGKDYIMDQLLDTKFLISPLSFYQVNPVQTEKLY
SLAIEKAQLTKDDIVIDAYCGIGTISLAMAPQVKHVYGVDVVKEAIQDARTNAKLNHIEN
VTFVTGKAEDQMQKWEADGIKPDVIVVDPPRKGLDVSFIESAVKMQPERLVYVSCNPATL
VRDAQLLLDGGYTIDQPVQPVDQFPQTPHVESVTVFTRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaataagcaagcaccagtaacgaaaaacgaaacgctcgacgtggcggtgacc
gacctgacctacgaagggatgggcgtggccaaggtggacggcggctacccgcttttcatc
gaagacgcccttcctggggaacaagtcacggtcaaggtgatcaaggtcaaacgaaacttt
gcctttgccaagttactcgagaccaagcaggccagtccggacagggtgaccacggtggat
cggcggttgacgcaggccggaattgctcccttgcaacacctgagttatgcgaagcaattg
gagtttaaacaacaccagattgccgagttgttccaaaaggcccatttggaacaggttcag
gtggctccgacgattggaatggaccatccggtgcagtaccggaataaggcccagattcca
gtgcgggaacaacacggacagttggaaactgggttttaccggcgccatagccatgacctg
attccaatcgaagacttttacatccaggatccagcaattgatgatgccatcgtgaaggta
cgcgacgtcttacgggacttccaaatcccggcctacaatgaaacgacccatcaaggagtg
gtacgtaacatcatggttcggtacgggaagtatagccacgagctgatggtggtgttggtg
atcaacgaccggcacctgccgcgggccgcagaaattacggccgcgattgaagccgccttg
cctaacttggatagcctcgtggtgaacgtgaaccagagtactggcaatcggttgctgggg
gacaagaatacggtgctggctggcaaggactacatcatggaccagctgttagatacgaag
ttcttgatttcaccgttatcgttttaccaggttaatccggtacaaacggaaaagctatac
tcgttagcgattgagaaggcgcagttgaccaaggatgacatcgtaatcgatgcctactgt
gggattgggactatttcgctcgcaatggcgccgcaagtgaagcacgtttacggcgttgac
gtggttaaggaagccattcaggatgcccgcacgaacgccaagctgaaccacattgaaaac
gtgaccttcgtgaccgggaaggccgaggaccagatgcagaagtgggaagccgacgggatt
aaaccggatgtgattgtcgtggatccaccccggaagggactagatgtcagctttatcgag
agtgccgtgaagatgcaaccagaacgactggtgtacgtttcgtgtaatccagctacgttg
gtgcgcgatgcgcagttgttgcttgacggaggctacacgattgaccaaccggtacaaccg
gtggaccagttcccacagacgccgcatgtggagagtgtgacggtgtttacaaggaagtag
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