Fructilactobacillus myrtifloralis: M3M35_04640
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Entry
M3M35_04640 CDS
T08864
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
fmt
Fructilactobacillus myrtifloralis
Brite
KEGG Orthology (KO) [BR:
fmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmt03400
]
M3M35_04640
Enzymes [BR:
fmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M35_04640
DNA repair and recombination proteins [BR:
fmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M3M35_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
USS84607
LinkDB
All DBs
Position
complement(915817..919374)
Genome browser
AA seq
1185 aa
AA seq
DB search
MSLQFILGLASADHFGQVVQSMHQAAEQHPDDQYFQIVPNNVKFEAELGTLKRLNMHQRA
TYAQNQIQTFSFSRLIWYFLRDQPPYQVPQLSPVAINMIIFQIIAKHEADLTIYRGEGKQ
AGFIQQVAEQLMELQQGNLSPDDLHQLQTNTTGELRNKLHDLELIYRAFLQATDGKYLYQ
AATLELLNEYLLRMPAQQLEQLHFYFTGFSELTAQEIQLVHTLIRRAHVVVDLTLDQPVR
EAAPSPEAFFAQPGRLYYRLYQYAREHSRMLPDQYAPARNLQPGLTQLEEYWISSSELER
KLPKAPATNPNLHVFQAATPFDELMNVATKVRQLVATGKYRYGDFLVVARNLSDYENIID
PIFSMQQIPYFTDIQKQMENHPLVVLLQALFAIYKPNRARNYRYEDVMKLLKTELLIPKQ
DEKHFEGLDDFRWQLALCENLVLKNGYYGKKWTQQADWKYTTVVDETTGVVVDKNQAVSQ
AINQIRHFVKDNLPPFYRRLTKAQTGREAAQILYQFLVNHGVPARLQEWQQQATEAGKLQ
EAGQAEQVWNEFCHILDDYVNVLGDQEFVQDDFLALLQAGFVGATYSQIPSTLDQVTISE
MGRYHLRDKRITIFVGADDHNLPVRIERQSLLSDGDRDQLGEQLAADQFLATTSETQMVA
EPYEDYLTFMTPQDQLYFSHHVGNGADDALLKQSPYVQRIQEFFGLNTETFHAQPDATNL
DVQPYLGSPRATLKYLIPAALASKKQRQPLNPSWATIQKTLEQAVDPALQRLTRNLMSSL
NYRNEPTPLQPEIVTGLYGQRILTSISKLEEFYSNPYEYFLEYGLRLKERDEFEINAAET
GSFYHDALDQLMKVVNQQNLELGELDNQQIKELVTEITTKLIEDDRTQRYEILQSSERMN
YLKGQLIQTVNEMAQTLRNQARHVHMRPRQTEVSFGPGQRYQELQFDLGNEQQVGVQGRI
DRIDGMDVAGTDYLNIVDYKSSQHKMNFAEIYDGTAMQMMTYMDAVLKNLDSISDADQAQ
LLGALYLRVFDPVLKPEDLENWQDAQKIQSSLLKKHKYSGILLADQDVLKSLGDQDVSEI
YPFAFTKNDSFNKQKSSVISQADLDRVIHHTEQLIQTAGKRIFAGDTRLWPARFQARSTI
TNSPYQAVMQFDPLLKENNYREVENLSMQAVLDKLRDEQKGDRHE
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgagcttacagtttatccttggacttgccagtgcggatcattttggtcaagttgtccaa
tcaatgcaccaagcggcagagcagcatccagacgaccagtactttcaaattgtcccgaat
aacgtcaagtttgaagcagaactgggaaccctcaaacgtttgaacatgcaccaacgggca
acctacgcccaaaatcaaattcaaaccttttcgttttcccggttaatttggtacttttta
cgggaccaaccgccttaccaggttccacaattgtctccagtagcgattaacatgattatt
ttccaaattattgccaagcacgaagctgatttaaccatttaccggggggaaggcaaacaa
gcgggcttcattcagcaggtggcagaacaactaatggagctgcagcagggcaacctgagt
cccgatgatttgcaccagttgcagaccaacaccactggagaactgcgcaataaactgcac
gacttggagctcatttaccgggcctttttgcaggcaaccgatggtaaatacctgtatcaa
gcggccactctagaactactaaatgaatatcttttacgaatgccggctcagcaattagaa
cagttgcacttttactttaccggctttagtgagttaacggcgcaggaaatacagttggtc
cacaccttgatcagaagggcccacgtggtagtggatttaacgttggatcaacctgtccgc
gaggcggctcccagtccagaagccttctttgcgcaacccggacgtttatattaccggttg
taccaatatgcccgggaacatagccggatgttgcccgatcagtatgcgccagcgcggaac
ttacaaccggggttaactcaattagaggagtactggattagcagtagcgagttggaacgg
aagcttccgaaagcccccgcaacgaatcccaatctgcacgtcttccaagcggccactcct
ttcgacgagttgatgaacgttgccaccaaggttcggcaactagttgccaccgggaagtac
cggtacggagatttcttggtggtggctagaaacctgagtgattacgaaaacatcattgat
ccaatcttttcgatgcaacaaattccgtacttcacggatattcaaaagcaaatggaaaat
cacccgttggtagtactgttgcaggcactttttgcgatctacaagccgaaccgggcccgt
aactaccggtacgaagacgtgatgaagctcttgaaaacggagttgttaattcctaaacag
gatgaaaaacactttgaagggctggacgattttcgctggcaactggctctatgtgaaaac
ctcgtccttaaaaacggctactacgggaaaaaatggacgcagcaagcggactggaagtat
acgaccgtcgtggatgaaaccacgggggtcgtcgtggacaagaaccaggccgtttcccag
gcaatcaatcagattcgccactttgtaaaggacaacttgccaccgttttaccggcggctg
accaaagcacaaacgggacgagaagccgcccaaattctctatcaatttttggtgaaccat
ggggtgccagctcggttgcaagagtggcagcagcaggctacggaggccggcaagctccag
gaagcgggccaggccgaacaggtgtggaatgaattttgccacattttagatgactacgtg
aacgtcttgggcgaccaggaatttgtccaagatgatttcttagcgctcttacaagccggg
tttgtgggcgctacctactctcagattccgtcgaccttggaccaggtaacgatttcagaa
atgggacggtaccacctccgggataagcggattacgatctttgtgggcgctgatgaccac
aacttaccggtgcggattgaacgccagagtctcttgagtgatggggatcgcgatcaactg
ggggaacagctggcagcggatcaatttttggccaccaccagtgaaactcagatggtggcg
gagccctacgaggattacttgacctttatgacgccccaggaccagttgtatttttcccac
cacgttggcaatggagccgatgatgcgttgctaaaacagtcgccctacgtgcagcgaatt
caggaattctttggtctgaacactgaaacatttcacgctcagccggatgcaactaacctc
gatgtccagccgtaccttggttccccccgggcgactttgaagtacctgattccagcggcg
ctcgctagtaagaaacagcgccagccattgaatcccagttgggcaaccattcaaaaaacg
ttagaacaagcagttgatcccgcattgcagcgcctgacgcggaatctgatgagtagtttg
aactatcgcaatgaacccacaccgttgcaaccagagattgtaaccggcctgtacgggcaa
cggattttgacctcaatttcgaagttagaagagttttattccaatccgtacgaatacttc
ttggaatatgggttacgactgaaagaacgcgatgaatttgaaattaatgcggccgaaacg
ggctccttttatcatgatgcgctcgatcaactgatgaaggtggttaaccagcaaaaccta
gaattaggtgaactggataatcagcaaatcaaagagttggtcacagagattacgaccaaa
ttgattgaggatgaccggacgcaacgctacgagattctgcagagttcggagcggatgaac
tacttaaagggtcaattaattcagacggttaatgagatggcacagaccctgcgtaatcaa
gcgcggcacgtgcacatgcgcccccggcaaactgaggtttcttttggccccggtcagcgc
taccaggagttgcaatttgatttaggtaatgagcaacaggtcggcgtgcaagggcggatt
gatcgaattgatggcatggacgttgctggaactgactacttaaacatcgtggattacaag
tcgagtcagcataagatgaactttgccgagatctacgatgggaccgccatgcagatgatg
acgtacatggacgcggtgttgaagaacctcgattctattagtgatgcggaccaagcccag
ctgctaggagcgctgtatttgcgcgtttttgatccggtgttaaagccggaggatttggag
aactggcaggatgcacaaaaaattcaaagtagcttgctaaaaaaacataagtacagtggc
attttactggctgatcaagatgttttgaagtcattgggcgatcaggacgttagcgaaatc
tatccgtttgcctttaccaaaaatgattcttttaataagcagaagagtagcgtcatttcc
caagccgatttggatcgggtaattcaccatacagaacagttgattcaaacggctggaaaa
agaatttttgctggggatacgcggctatggccggcccggtttcaagctagatccaccatt
acgaattcaccttaccaagccgtgatgcagtttgacccgctcctaaaggaaaataactat
cgtgaggtggagaatctcagcatgcaagcagtgctggacaaactacgagatgaacagaaa
ggagaccgtcatgagtga
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