Fructilactobacillus myrtifloralis: M3M35_06635
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Entry
M3M35_06635 CDS
T08864
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
fmt
Fructilactobacillus myrtifloralis
Pathway
fmt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M3M35_06635 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmt03400
]
M3M35_06635 (uvrA)
DNA repair and recombination proteins [BR:
fmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M3M35_06635 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M3M35_06635 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
AAA_33
AAA_21
AAA_23
AAA_15
BCA_ABC_TP_C
AAA_22
Viral_helicase1
NACHT
DnaJ_CXXCXGXG
cobW
RNA_helicase
ATPase_2
Septin
Motif
Other DBs
NCBI-ProteinID:
USS84962
LinkDB
All DBs
Position
1337568..1340423
Genome browser
AA seq
951 aa
AA seq
DB search
MANDVIKIRGAREHNLKDVNVDIPKEKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMNKPDVDSITGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGTP
VCPNDGTVIQSQSVDQMIDRIMELPERTKLQILSPIVRSKRGQHKKVLQRIKKEGFVRII
VDGEQHDVNDELELSKNQRHDISIVIDRIVVKPGINARLSDSLETALRLSDGYATLDFLG
QREPMLFSEHYSCPLCGFTVGQLEPRLFSFNSPLGACPECDGLGVKLEVDEDLVIPDPTK
TLREGVIEPWNPISSKYYPTLLEQAAAAFKIDLDTPFAKLPAAQRELLLHGSNGKQFHFH
YENDFGGVRDADVPFEGVMTNIARRYRETSSDFTRDQMRKYMRELTCQACHGLRLNPKAL
AVKVDGLSIAEVCEQNLTDEFNFFQQVTLGEQATTIAKPVIKEISDRLDFLLNVGLSYLT
LSRAARTLSGGEAQRIRLATQIGSNLSGILYVLDEPSIGLHQRDNDRLIKSLKQMRDLGN
TLVVVEHDHETMLAADYLVDVGPGAGENGGRIMATGTPAEVAQNPNSLTGQYLSGQKFIP
VPLRRRSGTGKAVTIKGARANNLQNITVQFPLGEFNVVTGVSGSGKSTLVNDILKRALAQ
KLNHNAAKPGRYKSITGYQQIEKLVSIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNEA
QLRGYQKGRFSFNIKGGRCETCRGDGILKIGMDFLPDVYVPCEVCHGKRYNAETLQVEYK
GKNIAEVLDLTVQEALDFFTAIPKITRKLQTIADVGLGYVKLGQAATTLSGGEAQRMKLA
SELHKRSSGKNFYILDEPTTGLHTDDVKRLLQVLQALVDEGNTVLIIEHNMDVIKQADHV
IDLGPEGGAAGGQVVATGTPEEIVQVAASYTGQYLKPILARDTKRTQAQAK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgatgtgatcaaaattcggggcgcacgggaacataatctcaaggacgttaac
gttgatattcccaaggaaaaactcgtcgtgatgacggggctttctggttcgggaaagagt
tcgttagcctttgatacgttgtatgcggaaggccaacggcgctacgtggaaagcttgtct
tcctatgcgcgccagtttttaggccagatgaataaaccagacgtggattccattaccggc
ttgagtccggcaatttcgattgaccaaaagacgacgtcgaaaaacccccgttcgacggtg
ggaaccgtcaccgaaattaatgattatttacggctcctgtgggcccgagtgggaacgccg
gtttgcccgaacgatgggaccgtaattcaaagtcaatcggtcgatcagatgattgatcga
atcatggagttgccggaacgcaccaagctccagattttatcgccgattgtgcggtccaaa
cggggtcagcacaaaaaggtgttgcaacgcatcaaaaaggaagggtttgtccggatcatc
gtggatggagaacaacacgatgtgaatgacgaactggaattaagtaaaaatcagcgtcac
gacattagcattgtgattgaccgaatcgtggtcaaaccgggcattaacgctcggttatct
gattcattagaaacagccctgcggttaagcgatgggtacgccaccctcgactttttgggt
caacgggaaccaatgctcttttccgaacactattcgtgtccgctctgtggctttacggtc
gggcagttagaaccgcggctcttttcctttaattcgccgttaggagcttgtcctgagtgt
gatggcctcggggtgaaactcgaagttgatgaggacctcgtgattcccgatccaactaaa
accctccgggaaggggtgattgaaccgtggaatccgattagttcgaaatactatccgacg
ttactagaacaagcggcggcggcctttaagattgatctggataccccgtttgccaagtta
cccgctgcccaacgcgaattgttattgcacggttccaacggcaaacagttccactttcat
tatgaaaatgattttgggggcgtccgggatgccgacgttccgtttgaaggagtcatgacc
aacattgcgcgccggtaccgtgaaaccagtagtgactttacccgcgatcaaatgcgcaag
tacatgcgggaactaacttgtcaggcttgtcacggcttgcggttaaatccgaaggctctg
gcagtgaaagttgacgggcttagcattgcggaagtttgtgagcaaaacctgacggatgaa
tttaacttcttccagcaagtgaccctcggcgaacaagccaccacgattgccaaaccggtg
attaaggaaattagtgaccggttggacttcctgttgaacgtgggcttgagttatttgacg
ctttcccgggccgcacgcacactgtccgggggtgaagcccaacggattcggcttgccacc
cagattggttcgaatttatcaggaattttatacgttctagatgaaccttcgattggcttg
caccagcgcgataacgatcggttaattaaatcactaaaacagatgcgggacctgggcaac
accctcgtggtggtggaacacgatcacgagacgatgctggctgcggattacctggttgac
gttggtcccggagccggagaaaacggggggcgcatcatggcgactggtacgccggcggaa
gttgcgcagaaccccaactcgttaaccgggcagtatttatccggccagaagtttattccg
gtgccacttaggcggcggtcgggaactggaaaagcggttacgattaagggcgcacgggcc
aataacctccaaaacatcacggtgcaatttccacttggagagttcaacgtggtgacgggg
gtctctggctccggaaagtcgacgctcgtaaacgacattttaaaacgagcgttggcccag
aaattaaaccacaacgcggccaaaccaggccggtacaaatcaattaccggttaccaacag
attgaaaagttagttagcatcgatcaaagtccgattgggcggaccccgcgcagtaacccg
gcgacctatacgggcgtgtttgatgacattcgcgacctgttcgctaaaaccaacgaagcg
cagctccggggctatcagaagggccggttcagctttaacatcaaggggggccggtgtgaa
acctgtcgtggggatggaatccttaagattgggatggatttcctaccggatgtgtacgtt
ccctgtgaagtttgccatggcaaacggtataacgctgaaacgttacaagttgagtacaaa
ggcaaaaacattgctgaggtgcttgatttgacggtgcaagaagctctcgatttctttacc
gcgattccgaagattacgcggaaattgcaaacgatcgcggacgtgggcttaggctacgtt
aaacttggtcaagcggcgacgaccctctcgggaggagaagcccagcggatgaagttagcc
tcagaactacacaagcgctcctcgggaaagaacttctacattttggatgaaccgacgacc
ggtttgcataccgacgacgtcaagcggctcctacaagtcctgcaggcactggttgacgaa
ggcaatacggtgttaatcattgaacataacatggatgtgattaagcaggccgaccacgta
atcgacctgggtccagaagggggcgccgctggtgggcaagttgtggccaccggtacgcca
gaagaaattgtgcaggttgccgccagctatacggggcaatacttaaaaccaattttagcg
cgtgatacgaaacgcacgcaggcacaggcaaaataa
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