Fusarium musae: J7337_000214
Help
Entry
J7337_000214 CDS
T09538
Name
(RefSeq) hypothetical protein
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
fmu
Fusarium musae
Pathway
fmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7337_000214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmu03019
]
J7337_000214
03041 Spliceosome [BR:
fmu03041
]
J7337_000214
03009 Ribosome biogenesis [BR:
fmu03009
]
J7337_000214
03016 Transfer RNA biogenesis [BR:
fmu03016
]
J7337_000214
Enzymes [BR:
fmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J7337_000214
Messenger RNA biogenesis [BR:
fmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
J7337_000214
Spliceosome [BR:
fmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
J7337_000214
Complex C
U4/U6.U5 tri-SnRNP related factors
J7337_000214
Ribosome biogenesis [BR:
fmu03009
]
Eukaryotic type
Pre-60S particles
Helicases
J7337_000214
Transfer RNA biogenesis [BR:
fmu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
J7337_000214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
Helicase_dom4_arc
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
68308071
NCBI-ProteinID:
XP_044685679
UniProt:
A0A9P8DR41
LinkDB
All DBs
Position
1:complement(588448..591793)
Genome browser
AA seq
1098 aa
AA seq
DB search
MDEMFDVFEGKVDAPSASEDENVPNHKGDTKKRKANAINGENGDALVKTQDVDMDAKTES
SKDGEDSSDDEESSESASQQESKRRKKEDDVGPVMTDTFQTAESREVAGAATFTEQDSSL
VLSHNIQHQVALPPDLDYEYVPLSEHKAPEQPARTWNFKLDPFQSLSVASIERDESVLVS
AHTSAGKTVVAEYAVAQCLKRNQRVIYTSPIKALSNQKYRDFEAIFGDVGLMTGDVTINP
TASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKIRGVVWEETIIMLPDKVRYV
FLSATIPNAFQFAEWIAKIHHQACHVVYTDFRPTPLQNYFFPCGGTGARLIVDEKSNFNE
QNFNKVMQEVEEKKGADPNDPNARQKGRGKNKKTDKGGADSGSDISKIIRMTIKRKFNPV
IVFNFSKRECENLAMNISSLSFNDDSEKAMVRKVFNSAIESLSEGDRELPQIINLLPLLE
RGIGVHHSGLLPILKETIEILFQESLIKVLFATETFSIGLNMPAKTVVFTQVTKWDGVKR
RPLTSSEYIQMAGRAGRRGLDARGIVIMMIDDKLEPDTAKEIVTGHQDRLNSAFYLGYNM
ILNLLRIEAISPEFMLERCFHQFQNAASVPSLEKELMSLQQERDNTSIADESTVKDYYQI
RQQLSAYTKDMRTVIQHPNYSLSYLQPGRLVQIYNPKDENETIAGTGTDFGWGVIVNQTP
RRAPKMGEPEYAPQESHVIDVLLPISRSSADFYPTQPVEDTPMPVGLKPFGDDDDDDVKF
AVVPCLLTCIKAISQIRLFLPKEGLKNDSEKETLTKSLMEVKRRFPDGLPVLDPIENMEI
TDESFKKLLRKIEVLESRLLANPLHLSPLLPALWDQYHAKVKLTEKVKETKKAIAKAYSI
AQMDELKSRKRVLRRLGFINDSEVVQLKARVACEISSTEGHELLLSELLFDRFFNELTPE
MCAAVMSCFIFDEKIETTQLKEELSKPYREIQAKARIIAKVSQECKLEVNEEEYIQKLKW
QLMETVYAWAQGRPFIEICKMTKVYEGSLIRLFRRLEELLRQMGQAAKVMGNDDLTKKFE
ESLSKIRRDIVAAQSLYL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggatgagatgtttgatgtgttcgagggcaaggtggacgccccgagcgcgagcgaagat
gagaacgtgccgaatcacaagggtgacactaaaaagagaaaggcaaacgcaataaacggc
gagaacggcgatgctttggtgaaaactcaggacgttgacatggacgccaagacagagtct
tcaaaagacggagaggattcttctgacgatgaagagtcttcggagagcgccagtcaacag
gagtccaagcggaggaagaaggaggacgatgttggtcctgtcatgacagatactttccag
acggccgagtcgagagaagttgctggcgcagctactttcacagagcaggattcatcgctt
gttttgtcgcacaacattcagcatcaggttgccctgcccccggacctagactacgaatac
gtccccctttccgagcacaaggcccccgagcaacctgcgcgaacatggaacttcaagctc
gatcctttccagagtctttccgtggcgtctatcgagagagacgagagtgtcctggtttcc
gcacacacttctgccggaaagactgttgtggctgagtatgctgtcgcgcagtgcttgaag
cgcaaccagagggtcatctacacaagtcccatcaaggctctaagtaatcaaaagtaccga
gatttcgaggccatctttggagatgttggtctcatgactggtgacgttaccatcaaccct
acggcaagttgtcttgtcatgacgactgagattttgcgatctatgttgtatcgcggttca
gagattatgcgagaagtcgcctgggttgtgtttgatgagattcattacatgagagacaag
ataagaggtgttgtttgggaagagaccattatcatgcttcccgacaaggtccgatacgtc
ttcctctctgccaccatccccaacgctttccaattcgccgagtggattgccaagatccat
catcaagcttgtcacgttgtgtataccgatttccgacctacacccctacagaactacttc
tttccgtgtggcggcactggcgctcgtctcatcgttgatgagaagagcaacttcaatgag
cagaatttcaacaaggtcatgcaagaggttgaggaaaagaagggtgctgaccctaacgat
cctaatgctcgtcagaaaggaaggggcaagaacaagaagaccgacaagggtggcgctgat
agcggctcggatatctccaagattattcgaatgactatcaagaggaagttcaaccccgtt
attgttttcaactttagcaagcgagagtgtgagaacctggccatgaacatttcatcactc
agcttcaacgacgattctgagaaggccatggtccgcaaggtttttaacagcgctattgag
agtttgtcagagggagaccgagagcttcctcagattatcaacttgttgcctcttctggag
cgaggtattggtgtgcatcactctggtctgttgcctattctcaaggagaccattgagatt
ctcttccaggagtctttaatcaaggttcttttcgcgactgagaccttctccatcggtctc
aacatgcctgccaagactgttgttttcacccaagttaccaagtgggatggtgtcaagaga
cgccctctcacttcatccgagtacattcagatggctggacgtgctggtcgtcgtggtctt
gatgctcgaggtattgtcatcatgatgattgacgacaagctcgaacccgacaccgccaag
gagattgtcaccggccaccaagatcgactcaactctgctttctacctcggttacaacatg
attctcaaccttcttcgtatcgaggctatttctcccgaattcatgctggagcgatgcttc
catcaattccagaatgccgctagtgtcccctctctggagaaggagttgatgtcactacaa
caggagcgcgacaacaccagcatcgccgacgagtccacggtcaaggattactaccagatt
cgacagcagctcagcgcctatactaaggatatgcgcactgttatccagcaccccaattac
agtctttcttacctgcagccaggccgcttggtgcagatttacaaccccaaggacgagaac
gagactattgctggcaccggaaccgatttcggctggggtgtgatcgtcaaccaaacccct
cgccgcgcgcccaagatgggcgaaccagaatatgcccctcaggaatcccatgtcattgac
gtgcttcttcccatctcccgatcgagcgcggatttctaccctactcaacctgtcgaagat
acccctatgcccgttggcctcaaacctttcggcgacgacgacgacgacgacgtcaagttt
gcggttgtcccttgtctcctaacttgcatcaaggctatcagtcaaattaggcttttccta
cccaaggaaggcctcaagaatgattcagaaaaggagacgctcacaaagtctttgatggag
gtcaagcgccgtttccccgatggtctgcctgttctagaccccatcgagaacatggaaatc
accgatgaatcgttcaagaagctccttcgcaagatcgaagtcctcgagtcccgacttttg
gccaaccctcttcacctttcgcctcttcttcctgctctctgggaccagtaccacgccaag
gtgaagcttaccgagaaggtcaaggagaccaagaaggccatcgccaaggcgtacagcatc
gcccagatggacgaactcaagtctcgcaagcgtgtactgcgacgtctcggctttattaat
gattccgaagtcgtccagctaaaggctcgcgtcgcctgcgagatttcctccactgaaggc
cacgagctgcttctctccgagttgctctttgacagattcttcaacgagcttactcctgag
atgtgtgctgctgtcatgagttgctttatctttgatgagaagattgagacgacccagctc
aaggaggagttgtcgaaaccttaccgtgagattcaggccaaggctcgcatcattgccaag
gtcagccaggaatgcaagcttgaggtcaacgaggaggaatacatccagaagctcaagtgg
cagctgatggagacggtctacgcatgggcccaaggacgtcctttcattgagatttgcaaa
atgacaaaggtctacgaaggttcattgatccgtctcttccgtcgtctggaggagctgctt
cgccagatgggccaggccgccaaggtcatgggcaacgacgatctaacgaagaagtttgag
gaaagtttatccaagatccgcagagatattgtggccgcgcagagcttgtacctataa
DBGET
integrated database retrieval system
