Fusarium musae: J7337_005542
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Entry
J7337_005542 CDS
T09538
Symbol
SPT6
Name
(RefSeq) Transcription elongation factor spt6
KO
K11292
transcription elongation factor SPT6
Organism
fmu
Fusarium musae
Brite
KEGG Orthology (KO) [BR:
fmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmu03021
]
J7337_005542 (SPT6)
03036 Chromosome and associated proteins [BR:
fmu03036
]
J7337_005542 (SPT6)
Transcription machinery [BR:
fmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
J7337_005542 (SPT6)
Chromosome and associated proteins [BR:
fmu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
J7337_005542 (SPT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
SH2
S1
HHH_3
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
68313398
NCBI-ProteinID:
XP_044681709
UniProt:
A0A9P8DIW5
LinkDB
All DBs
Position
4:1917327..1921728
Genome browser
AA seq
1406 aa
AA seq
DB search
MSNSMRDLISGEAELDDEEEDESFDEGGEERRRKAAVEDSSEEEEDDDDEEEARKVREGF
IVDEDEDEEEGGESDGDVRPVHKRKRKHRDREEEAQLDEEDLDLIGEQFGERPKPQTQSK
FKRLKRGYRDEERGNQRRGLDDIFSDEDEDASEQRPYGRSYRQADEFDDFIEEDFPEDPE
ELEQQREDAEVARPRDRVIGNIADTGNLDKDALDDMEAIFGNGEDYDWALQMEEEEEDRE
REEQAIELKDVFEPSQLKEKLLTDEDNEIRFTDEPERFQLDRKTFKTLQLTAEQFKEEAR
WITNQLWPKKGLAADLQIPFGKAVGKVLEFFIVDEVEVPYVFQHRKDYLLHTRKTRNPNR
DDPDAPEYVISADKLLNQDDLWKILELDIKFRSFVDKRNALEKTFENLKGLAIHDTIVEE
MIPEATTMEELQDLQDYLQFQYGPQLKDLAAMAGNLSLTKRPGSKSNLLERVRQGKAYSF
VRAYGISADQLAKNALRHGKKITPDDDAQYPMDLADSLVDDSFDTGDQVINAARQMYAEE
LFASPRMRKHFRNSYYQAAEISCRRTEKGLRRIDDSHPYYEIKYLQNQAIADLVHQPELF
LKMMKAEEEGLVTIKLDMPARYDFRRQLYQEFESENFSDRAEQWREERKKVLDLAYPKLE
RIIAKNVKEVIRTFCQDEVLKMCREEYAKRLDQAPYKPKGMILGTTPRVLVLSNGMADPA
RDPICWAWVEEDGRVIEQGKLGNLARDERQREEFEELVKRRRPDVIGVSGWSAETTKLVR
DLESLVNEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHPSLNPVTR
YCVALARYMQNPMKEYAALGKDVASISYHPCQNLLPPDKLAKYLDSAMVDMVNLCGVDIN
EAMNDSYTANLLPYVSGLGPRKATSVIKAINANGGAVGTRDELVGDPDSGKLPVVGPRVW
NNCASFLFIEYEATNPASDPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDENGPGA
IVRKLFKQDEQDKVNELVLEEYAEQLERNYSQRKRATLETIRAELQAPYEELRRNFALLS
ASEIFTMFTGETKQTLCEGMIVPINVRVVKDDFAIVKLDCGIEGRIEGHEINHRSSIKDA
LASGQTTQAKILDINYKDFMAKLSMRDETLRIPYKRPINLGRDGWDYALEAADKEELREK
DKTTGRTQRVVKHPNFKPFNGLQAEEYLGSQPNGEVIIRPSSKGNDHLAVTWKVADGVYQ
HIDVLEMQKETEFSVGKLLRVGGKYTYTDLDEMIVEHVKAMARKVEELMRHDKYQNRSRG
ETEKWLTTYIDANPNRSAYAFCIDTKHPGYFWLCFKASRSARVIALPVRAIPQGFELKGY
QYPDMRALCNGFKLRYQNEFSKMGHR
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagtatgcgcgacttgatatccggcgaggccgaacttgatgacgaggaagag
gatgagtcctttgatgaaggtggtgaggagcgcagacgaaaggctgccgtggaagactcc
agtgaggaggaggaagacgatgacgatgaggaagaggctcgcaaggtccgtgaaggattt
attgttgatgaggatgaggacgaggaagaaggcggcgaatcagatggcgatgtgcgtccc
gttcacaaacgaaagcgaaaacatcgcgatcgtgaagaggaggcacagcttgatgaagaa
gatctggatctcatcggcgagcaattcggcgagcgtcccaagccccaaacacagtccaag
ttcaagcgcctcaagcgtggctaccgcgacgaagaaaggggaaaccaacgccgtggcctg
gacgatatcttctcggacgaagacgaagatgcaagcgagcagcgaccttacggcagatcg
taccgccaagccgacgaattcgacgatttcatcgaagaggatttccctgaagaccctgag
gaattagaacaacaacgagaagatgcggaggttgctcgccccagagatcgtgtcattgga
aatatcgccgatactggtaatctcgataaggatgccttagacgatatggaggccatcttc
ggtaatggcgaagactacgattgggcgctgcaaatggaagaggaggaggaagatcgtgaa
agagaggaacaggccattgagctgaaggacgtattcgagccatcgcaacttaaagagaag
ctcttgaccgacgaagataacgagattcgttttaccgacgagcccgagcgatttcaactc
gaccggaaaaccttcaagactcttcagcttactgcagagcaatttaaggaggaggcaaga
tggatcacgaaccagttgtggccaaagaagggtttggcggccgacctccagatcccattc
ggcaaagctgttggcaaggtcctcgaattcttcattgttgacgaagttgaggtgccttac
gtgttccagcatcgcaaagactacctacttcacaccagaaagacacggaatccgaaccgt
gatgatcctgatgcgccagagtacgtcatcagcgcagacaagctcttgaatcaagacgac
ctttggaagatcttggaattggacataaaatttcgttcttttgtggacaagagaaatgct
ctcgagaagacctttgaaaatcttaaaggattggcaattcacgacacaattgtggaggag
atgattccagaggcgacgaccatggaagaacttcaagatttgcaagactatttgcagttc
cagtacggtccacagctcaaggacctcgctgctatggctggaaacctctcgttaacaaaa
cggccaggctcaaagtcaaatttgcttgaacgagtgcgccaaggcaaggcctatagcttc
gtccgtgcttatggaatctcagcggatcagcttgccaagaacgccttgcgacatggaaag
aagatcactcctgatgatgacgctcagtatcccatggacctggctgacagtttggtcgac
gacagcttcgacacaggcgaccaagttattaacgcagctcgacagatgtacgctgaagaa
ttgtttgcaagcccaaggatgcgcaaacattttcgaaattcgtactaccaagctgctgag
atcagctgtcggcgaactgagaaggggctacgtagaatcgatgattctcacccgtactat
gaaatcaagtatttgcaaaaccaggccattgctgatctagtccaccaaccagagcttttc
ctgaagatgatgaaggccgaggaggaaggccttgtcaccataaagcttgatatgccagct
cgatatgatttccggagacaactttatcaggagttcgagtctgagaatttcagtgaccgg
gccgagcagtggcgtgaagaacgcaagaaagtacttgaccttgcatatcccaaactcgaa
aggattattgcaaaaaacgtcaaagaagtcattcgaactttctgccaagatgaggtgctc
aagatgtgtcgagaagaatatgcaaaacggctcgatcaggcgccctacaaaccaaagggc
atgatactgggcaccacgcctcgtgtcctagttctctccaatggcatggccgaccctgcc
cgcgatcccatctgctgggcatgggttgaggaagatggtcgtgtcattgagcaaggaaag
cttgggaacctagccagagatgagcgccaacgagaagagttcgaggaacttgtcaagcgt
cgccgacccgatgtgattggcgttagcggttggtctgctgagacgactaagctggtacgt
gacctggagagccttgtcaacgagaagggccttatgggccctgagtttgaggacccagac
accaatgactatcgaacagagccactggaagttgtggtggtcaatgatgaggtcgctcgt
ttgtacaaggacagtcctcgtgcacttgctgagcacccaagtctgaatcctgtgacgagg
tactgtgttgctctggcgcgatatatgcagaaccctatgaaggaatatgctgctctcggc
aaagacgttgcctccatttcttaccacccttgccaaaaccttctcccacccgataaacta
gccaaatacctcgactccgccatggttgacatggtcaacctctgcggtgttgatatcaac
gaggccatgaacgattcctataccgccaaccttcttccttacgtgtctggattgggtccc
cgcaaggcaacaagtgtcatcaaggccatcaacgcgaatggcggtgccgtgggtacaagg
gatgagcttgtgggtgatccagatagtggcaaactgcctgtcgttggccccagagtttgg
aacaactgcgccagctttctgtttatcgaatacgaggccacaaaccctgcttcggacccc
ctagacaacacacgagttcaccctgaagattacgagctcggacggaaaatggctgccgat
gctcttgagcttgacgaagaggacgtcaaagccgaaactgacgagaatgggcccggggcg
atcgtccgcaagctgttcaagcaggatgaacaagacaaggtcaacgagctcgtcctggaa
gagtatgcagagcaattggagagaaactacagccagcgcaagcgagctacattggaaaca
atccgtgccgaactccaggcgccctatgaagaacttcgacggaattttgctctcctgtcg
gcatccgagatcttcaccatgtttactggtgagaccaagcagactctatgcgaaggcatg
attgtacccatcaatgtgcgggttgtgaaggatgacttcgccattgttaagctcgactgt
ggtatcgaaggccgtatcgagggtcatgaaatcaaccatcgttcgtccattaaggatgcc
ctggcctccggacaaacgacgcaggcaaagattttggacatcaattataaagactttatg
gctaagctgtcaatgcgggatgaaactctacgtattccgtacaagcgcccgatcaacctc
ggccgagatgggtgggactacgcccttgaagcagcagataaagaggaattgcgagaaaag
gacaagaccacgggacgaacccagcgcgttgtcaagcaccccaatttcaaaccgttcaat
ggcctgcaagcagaagaatatctgggttcgcaacccaacggtgaggttatcattcgaccg
tcatccaagggtaacgaccatctggcagtgacctggaaggtcgcggatggtgtttaccaa
cacattgacgtccttgagatgcagaaagaaacagaattctcggtcggcaagctgctgcgc
gttggcggcaaatatacgtatactgacctggacgagatgatcgtggagcatgtgaaagcc
atggcgcgtaaagttgaagaactgatgcgacacgataagtatcagaaccgatcccgggga
gagacggaaaaatggctcacgacgtacatcgacgccaatcccaaccgatcggcttacgcg
ttctgcattgacacgaagcatcccggatacttttggttgtgcttcaaggccagtaggtca
gccagggtgattgcattaccagtgcgcgcaattccacaagggtttgagctcaaggggtat
caatatcctgacatgcgagcgctgtgcaacggattcaagctgcgttatcagaatgagttc
tccaagatgggtcaccggtag
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