Fusarium musae: J7337_008875
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Entry
J7337_008875 CDS
T09538
Symbol
LSM7
Name
(RefSeq) Sm-like protein lsm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
fmu
Fusarium musae
Pathway
fmu03018
RNA degradation
fmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
J7337_008875 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
J7337_008875 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmu03019
]
J7337_008875 (LSM7)
03041 Spliceosome [BR:
fmu03041
]
J7337_008875 (LSM7)
Messenger RNA biogenesis [BR:
fmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
J7337_008875 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
J7337_008875 (LSM7)
Spliceosome [BR:
fmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
J7337_008875 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
Motif
Other DBs
NCBI-GeneID:
68316731
NCBI-ProteinID:
XP_044679398
UniProt:
A0A9P8DEN0
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All DBs
Position
6:complement(3306916..3307460)
Genome browser
AA seq
133 aa
AA seq
DB search
MSDRPSHRGGRGGQGSHSRGGRGGGRGGGGAGGAQQERERPKKENILDLGKYMDKQITVK
FNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNDSTRSLGLVVVRGTLLVLVSPVDGS
EEIANPFVQAEDD
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagaccctcacaccgaggcggccgcggtggccaaggatcgcattcacgaggt
gggcgcggaggcggtcgtggaggaggcggcgcgggaggcgcccagcaggagcgcgagaga
cccaagaaggagaacattcttgacttgggcaagtacatggacaagcagatcaccgtcaag
tttaacggcggtcgtgaggtcaagggcacattgaagggctatgatgctcttatgaaccta
gtactagatgatgtacacgaggttgttcgagacgacgaaggcaacgactccactcgatcc
cttggcctcgtagttgttcgaggtactctccttgttctcgtcagccctgtcgacggcagt
gaagagattgccaacccttttgtgcaagccgaggatgattga
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integrated database retrieval system