Fusarium musae: J7337_009824
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Entry
J7337_009824 CDS
T09538
Symbol
PRP43
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase prp43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fmu
Fusarium musae
Pathway
fmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
J7337_009824 (PRP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fmu03041
]
J7337_009824 (PRP43)
03009 Ribosome biogenesis [BR:
fmu03009
]
J7337_009824 (PRP43)
Enzymes [BR:
fmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J7337_009824 (PRP43)
Spliceosome [BR:
fmu03041
]
Complex A
U2 snRNP components
U2 related factors
J7337_009824 (PRP43)
Complex B
J7337_009824 (PRP43)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
J7337_009824 (PRP43)
Ribosome biogenesis [BR:
fmu03009
]
Eukaryotic type
90S particles
Helicases
J7337_009824 (PRP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
AAA
NB-ARC
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
68317680
NCBI-ProteinID:
XP_044678013
LinkDB
All DBs
Position
7:2149678..2152053
Genome browser
AA seq
767 aa
AA seq
DB search
MSDIKGGKRSSADADESTRKKAKKDGEDEKYNPYLAHMYDNGNSNGNGAEPSPDSPLAGM
KRQHTTAAQASKAEDSESNPFTGRPHSQKYFQILQGRRDLPVHKQRQEFLDKYHSTQILV
FVGETGSGKTTQIPQYVVYDELPHLTGKLIACTQPRRVAAMSVAQRVADEMDVTLGEEVG
YSIRFEDMTGPKTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMALLKQ
ISMRRPDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIRT
VLQIHASEPEGDVLLFLTGEDEIEDACRKISLEADELMREVDAGPLAVYPLYGTLPPHQQ
QRIFDKAPPPIRKGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESL
LVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELKK
LGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSMASAFPLDPALAVMLI
SSPEFYCSNEILSITSLLSVPQIFTRPANNRKRADEMKAQFAHPDGDHLTLLNAYHAFKG
QATSDPNSAKQWCHEHFLSYRHLSSADNVRAQLKRIMETHGLELVSTPFEDKNYYTNIRR
ALLAGFFMQVAMKESSGKLYRTVKDDQAVLIHPSTVLRTEFDWVLYNEFVLTSKQYIRTC
TGIRPEWLLEIAPTYYDIDSFEQGDVKRSLARAAEKKRRKEAMKAGR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatcaagggaggaaagcgttcaagcgccgacgccgacgaatctacgcgaaag
aaggccaagaaggacggcgaggacgagaaatacaacccctaccttgctcacatgtacgac
aacggtaacagcaatggtaatggcgcagagccttcgccggactctcctctcgccggtatg
aagaggcagcatactaccgctgcccaggcttcaaaagctgaggactctgagtcgaaccct
ttcaccggccgacctcattcgcaaaagtacttccagattctccagggccgtcgcgatctg
ccggtccacaagcaacgacaagagtttttggacaagtatcactcaacacagattctcgtc
tttgtcggtgagacaggttctggaaagactactcaaattcctcagtatgtcgtctacgac
gagctacctcatcttaccggcaagcttatcgcctgtacgcagccacgtcgagtcgccgcc
atgtcggtcgcccagcgtgtcgccgacgagatggacgtcaccctaggcgaggaagttggt
tacagcattcgtttcgaggacatgacaggtcctaagactatgctcaagtacatgactgat
ggtatgcttctgcgcgaggccatgcacgaccacgagatgtctcgctacagttgtatcatt
ctcgatgaggctcacgaacgtactctcgcgaccgatattctcatggctctgctcaagcag
atttctatgcgccgtcccgacctcaagatcattatcatgtctgctactctcgatgctcaa
aagttccaaaagtatttcaacgatgcgcccctgctcgctgtccccggtcgaacacaccct
gtcgagatcttttacacccccgagcctgagcgcgattacgtcgaggccgccataagaacc
gttctccagattcacgcttcagagcctgagggtgatgttttgcttttccttactggtgaa
gacgagattgaggacgcttgtcgcaagatcagcctcgaggctgatgagctgatgcgcgag
gtcgacgctggtcctctcgccgtttaccctctatatggtaccctgcctccccaccagcaa
cagcgcatcttcgacaaggcccctccgcctattcgcaagggcggtcgtcctggtcgcaag
gtcattgtttccaccaatattgccgaaactagtttgactatcgacggtatcgtctatgtc
gtggatcctggttttagcaaacagaagatctacaaccctcgtatccgtgtcgagtccctt
cttgtctcgcccatctccaaggcttcagcccagcagcgtgctggtcgtgctggtcgtacc
aagcccggaaagtgtttccgtctgtacaccgagaaggcattcaagaaggagcttattgag
caaacatatcccgagattctgcgctccaaccttgccaacaccgttctggagctaaagaag
cttggtgtggaggatcttgttcacttcgatcttatggacccccccgctcccgagaccatg
atgcgcgccctggaggagctcaactatcttgcctgtcttgacgacgatggtgagctgacc
actctcggcagcatggcctcagcattcccccttgatcccgctctggcggtcatgcttatc
tcgtctcccgagttctactgctccaacgagattctctctattacctcgcttctctcagtt
cctcaaatctttactcgccctgccaacaaccgaaagcgcgccgatgagatgaaggctcaa
ttcgcgcatcctgatggtgaccacctcaccctgctcaacgcctaccacgctttcaagggc
caggccacatctgaccccaacagtgccaagcagtggtgccacgagcacttcctctcctac
cgacatctctcaagtgcggataacgttcgcgctcagctcaagcgcatcatggagacgcac
ggcttggagcttgtgtcgacaccattcgaggacaagaattactataccaacattcgacgc
gcactgctcgccggtttcttcatgcaggtcgccatgaaggagagctcaggcaagctctat
cgcactgtcaaggacgaccaggctgtgttgattcacccctcaactgtcctccgcaccgag
tttgactgggtcctctacaatgagtttgtcttgacatccaagcaatacatccgaacatgt
acgggtatccggcctgagtggttattggaaattgcccctacatactacgatatcgacagc
tttgagcaaggtgacgttaagcgttctcttgcacgcgctgcagagaagaagcgccgcaag
gaagccatgaaggctggtcgatga
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