Fusarium musae: J7337_011857
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Entry
J7337_011857 CDS
T09538
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
fmu
Fusarium musae
Pathway
fmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
J7337_011857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmu03021
]
J7337_011857
03019 Messenger RNA biogenesis [BR:
fmu03019
]
J7337_011857
Transcription machinery [BR:
fmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
J7337_011857
Messenger RNA biogenesis [BR:
fmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
J7337_011857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
VHS
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
68319713
NCBI-ProteinID:
XP_044676066
UniProt:
A0A9P8D870
LinkDB
All DBs
Position
9:1945420..1947367
Genome browser
AA seq
606 aa
AA seq
DB search
MSGDSAEVAEDYRMALEDLSSNMRFEISNLTVIARENTEHALAIAEVLQQHILKAPPNKK
LPALYVLDSIVKNVGTPYTLYFGRNLFKTFMESYAVVDQPVRRKMEEMLRTWKEPVPGSM
DSRPVFSHELVRPIENALLKARAVSMPQAGLMPGRPRSAVPHRDTPTPPGTRYPPGHPAQ
QYTSNGGQSLSNDIRNLIVATQAEASRNPQNVDVQTRLRALHELQGVVNSTSLPPDQLEL
IKRRVTELAAVNMMAPLTQRPAPTPPVPVQARPMPPVSVALPPSAAPAPAQEGVTLDALF
GPGALAALMARKSATPSSSTPTPQPPQVRSEPPKPPMPNMSAMPAMAPMPAMSIPTIPGM
TPMPTMSQTPTPASAPAPAANAAPWSLLDQLRKSGLLPPAPSATPTPVPVQGGINVAALK
QPCQPSLIRALHNDLGQPCTQCGRRFRDDPVGKKQKIAHMDWHFRVHQRTNEAEKRGMHR
SWYVDQRGWLKSREAVDVDHLPTTEDVAAQASKASEAAKPKYILVPDASRRINTVCPICQ
DKFENKWLDTAQEWVWLDTVLVGDRAYHASCHAEATRDRENTPILGKRKAETSLASPKVR
SLKTSA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagactctgctgaggtggcggaggattaccgcatggccttggaggatctctcc
tccaacatgcgcttcgagattagcaacctgacagtcattgctcgtgagaatactgaacat
gccctagctatcgccgaagttttgcaacaacacatcctcaaggcgccaccgaacaagaaa
cttccagctctgtatgtactcgactcgatagtgaaaaatgtcggcacaccatacaccctc
tacttcggccgcaatctgttcaagaccttcatggaatcttatgcagtagtcgatcaacca
gttcgtcgaaaaatggaggagatgcttagaacatggaaggagcctgtccctgggtcaatg
gacagcaggcccgtcttttcgcacgagttggtgcgtcctattgagaatgcactcttgaag
gcacgcgccgtaagcatgccccaagcgggattgatgcctgggcgaccgcgatctgccgtg
cctcatcgtgatactccgacaccgcctgggacgagataccctccaggccatccagcccag
caatacacttcaaatggaggacagtcattgagcaatgacattcggaatctaattgttgcc
acgcaggcggaagcctcgcgcaatccccaaaatgttgatgttcagactagattaagagca
cttcatgagctgcagggcgttgtgaacagcactagcttgcctccggatcagcttgagctc
attaagagacgagtaactgaacttgctgccgtaaacatgatggcgcctctgactcaaagg
cctgcacctactcctcctgtgcccgttcaagcacgccctatgcctccagtgtccgtagcc
cttcctccgtctgcagctccggctccggcgcaagaaggtgtgacgcttgatgcgctcttt
ggcccgggagccttggccgccttgatggcaagaaagtcggctacaccttcgagctcaaca
ccgactcctcagcctcctcaggttcgttctgaaccgccaaagccacctatgccaaacatg
tctgcaatgccggccatggctcctatgccagcaatgtcgatacccacgatacctgggatg
actccaatgcctacgatgtcccagacaccaacacccgcatcagcaccagcgcccgcagca
aacgcagccccttggagtcttcttgatcaactacgaaagtcaggcttactccctcctgct
ccttcagcaacgcccacgcctgttccagtacaagggggtatcaatgtggcagctctcaaa
caaccttgtcagccttctttaatcagggcactacataacgacctgggccaaccttgtacc
caatgtggtagacggtttcgagacgatccagttggaaagaagcagaagattgctcatatg
gactggcatttccgtgtccaccagcgaaccaacgaggccgagaagcgaggcatgcaccgg
agttggtacgttgatcaacgcggctggctcaagtcaagagaagccgttgacgttgaccac
ctccccacaactgaggatgttgccgctcaggcctcgaaggcatccgaggctgctaagcca
aagtacattcttgtccccgatgcgtctcgtcgtattaacactgtttgtccaatctgccag
gacaagtttgagaacaaatggcttgatacggcacaagaatgggtatggctagacacagtc
ttagttggcgaccgagcatatcacgcatcatgtcatgcagaagcaacacgggaccgcgaa
aacacaccaatactaggcaaacgcaaggccgaaacaagcctagcatcacctaaagtgcgg
tcactgaagacatcagcttaa
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