Ferrovum myxofaciens: HO273_02750
Help
Entry
HO273_02750 CDS
T06614
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fmy
Ferrovum myxofaciens
Pathway
fmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HO273_02750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fmy03019
]
HO273_02750
Enzymes [BR:
fmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HO273_02750
Messenger RNA biogenesis [BR:
fmy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HO273_02750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKE37786
LinkDB
All DBs
Position
complement(637265..638686)
Genome browser
AA seq
473 aa
AA seq
DB search
MKLMTFESLGLSPEILRAITDEGYTTPTPVQVQAIPLVLAGQDVQAAAQTGTGKTAGFTL
PILHRLQPMASSSPSPARHPIRCLVLTPTRELAAQVQESVKTYGRHLALRSTVIYGGVAM
PPQVKALQAGVEIVVATPGRLLDHVQQKTINLSQVEILVLDEADRMLDMGFIPDIRKIIA
LLPERRQNLLFSATFSEDIKKLSQGILNNPATVEVARSNTTAEGITQLIYPVEAERKRAL
LTHLIRTLPIPQAIVFTRTKHGANRLCAQLEKEQIPAAAIHSDKTQSHRMRSLEQFKAGE
VSILVATDIAARGLDIDQLPFVINFELPHVPEDYVHRIGRTGRAGSEGCAISLVSPEESR
ERQAIESLIKQTIREEVSVNFEVVEPVQRPEGRRPPREAEGRSRTDRRPVARQSEVEAVE
QVVREPKVPRPVPEVPRSVYSHHHFSRPPLGSSGIKKHREIPALLGGLLKKTP
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatgacatttgaatccttgggactttctcctgaaatactgcgagcgattaca
gacgaagggtacaccaccccaactccggtccaagttcaggccatccctttggtgttggcg
gggcaggatgtgcaggcagctgctcaaaccggaacaggaaagacggcggggttcactttg
cccattttgcatcgtctccaacccatggccagttccagcccttcaccggcgcgtcatccc
attcgttgtttggtactgacgccaactcgtgagttggcggctcaggtgcaggaaagcgtc
aagacctatggacgccacttggcattgcgcagtacggtgatctatggcggggtggccatg
cctcctcaggtcaaggcattgcaggctggcgtggagatcgtggtggcgactccgggacgc
ttgcttgatcatgtccagcaaaaaaccatcaatttgtctcaagtagaaattctggtactg
gatgaagcggatcgaatgctggatatgggcttcattccggatattcgaaagatcatcgcc
ttattgccggagcgtcgacaaaacttgctgttttctgcgacgttttctgaagatatcaag
aaattgtcccaggggatcctgaataacccggcaaccgtggaagtggcgcggtccaatacc
acggcagagggtattacccaactcatctatcccgtggaagcggagcgtaaacgggcgttg
ttgactcatttgattcgtacgctgcccattcctcaggccatcgtgttcacgcgtaccaaa
catggggccaatcgtttatgtgctcaactggaaaaagaacagattcctgcggcagccatt
catagcgacaaaacccagtcccatcgtatgcgcagtctggaacagttcaaggctggtgaa
gtctctattctggtggccacggacattgcggcacgggggttggatatcgaccaattgccc
tttgtgatcaactttgaacttccccatgtgccagaggattatgtgcaccgcattggccgg
accggacgggccggtagtgaaggttgtgccatttctctggtcagtccggaggaaagtcgt
gagcggcaggccatcgaatccttgatcaagcagaccattcgcgaagaagtttccgtgaat
tttgaggttgtcgaacctgtgcagcgccctgagggacggcgtcctccccgggaagccgag
ggtcgttcacgaactgatcgtcgtcctgttgcgcgtcagtcggaggtagaggcagtggag
caagtcgttcgagagcccaaggtgccccgtcctgtcccggaagtgccgaggtcggtatat
tcccatcatcacttcagtcgtcctcctctgggttcgtccggcatcaagaaacatcgtgaa
atccctgcgttgttgggaggtttgctgaagaagacgccgtga
DBGET
integrated database retrieval system
