Ferrovum myxofaciens: HO273_06155
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Entry
HO273_06155 CDS
T06614
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fmy
Ferrovum myxofaciens
Pathway
fmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HO273_06155 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmy03400
]
HO273_06155 (recB)
Enzymes [BR:
fmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HO273_06155 (recB)
DNA repair and recombination proteins [BR:
fmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HO273_06155 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
PDDEXK_1
AAA_22
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QKE38361
LinkDB
All DBs
Position
1358760..1362278
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AA seq
1172 aa
AA seq
DB search
MSDPLDPLTFPLWGSRLIEASAGTGKTWTLAALYVRLVLGHGTANHAPPGAFLPEQILVM
TFTRAATRELSERIRVRLEEAAACFRGDSLPTDDFLRSLLDDYPESSTRRRAAWRLTLAS
QAMEGAAIHTLDAWCQQVLQDTTFAHGQWFPAQITDNDEDLIPAALQDLWRQRLYPLSGL
EFRVFLEDWKDFSRFSQRIQKDLPKNTLPLWSTESVSINAIAWTEKHHAMTHELKTLRTL
WRPRIEILCAWLDGQLPPSQPDTPFNQKTFKGETVRQWCARLLHWCEENGPADPCLTEDQ
WDKLTLNGLQAQVKKNFQIDPPALFDELHDFRTALQNLKDQRKHLHDLMVEGVALRLAQH
KAQVLRQNFTDIQQRLDQALQGPQGEALVTSLRLRYPVALIDEFQDTSMRQLRMLDRIYD
LNANASERGIFLIGDPKQSIYGFRDADIQSYLKARASVAPRHYLLTTNHRSVAPVVELIN
RLFEGAEQRVGPGAFRFRAKDDAPLPFHPVQARGRDEQLLCDGRPQPALTVAWTTEPDNR
GQLFERMAEHCAEHLGRLLTSAAGFYTSGLQALLRPADLAILVRDRHEAAAVKSALERRN
IPSVYLSDRSHLLDSAETPDILLWLQSVAHPRNPRLLRAALGTSTLGFSLAELEQWARSE
TAFEEILNFWMELHHCWQRQGVLSMLQRLLHHFFLPARWLQEKDGERRLTQVLHLAEFLQ
RTSAHLEGPEALIQWLIHELQTPTSSPEELRLESDADRVRIITIHKAKGLEFPVVYLPFA
TCFKPQPEAEEKRLQEDIRLLYVALTRAQHALWIGVSPFKYKTSGPLFSASALGWLLGAT
PGAPAEELLPLLQETWKSLPEVHFTEASLPLSVTGFIPPPAPALRPASLVTGPFDRAWAI
HSFSSLTRSLAFVLPDSPTAQQNPPLPGTSPRHRFPRGAWAGKFLHEQLAWAAERRFTFD
TDPTLNLQLHQRCLRQGWETHAADLEQWLQEIALTPIAPSGVALRALPHTFQEMEFWFPL
QTTHTEELDDFCQTRFWPGHPRPPLTARTLKGLMMGFADLVFLWEDRFWVLDYKSNALGE
NDAAYTRTALEQAVLTHRYEVQLALYLLALHRLLKVRLGSTYIPRQHLGGGIDLFLRGIQ
GPERGSLLLESPHEWIETLDALLTPAFPGISS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccccttgatcctctgacctttcccctgtgggggagtcgcctcatcgaagcc
agtgccggaaccggaaaaacctggaccctggctgcgctctatgtgcgtctggtgttggga
cacggcaccgcgaatcacgccccccccggcgcgttcctgcccgaacagattctggtcatg
acatttacccgagcagccacccgcgaactttccgaacgcattcgagtgcgcctggaagaa
gccgcagcctgtttcagaggcgacagtcttcccaccgatgatttccttcgttccctgctg
gacgactatcctgaatcgtcgacacggcgccgtgccgcctggcgcctgaccctggccagc
caagccatggagggcgccgccatccacacgctggacgcctggtgccaacaggtgttacag
gacacgacttttgcccatggacaatggttccccgcccaaatcacggacaacgacgaagac
ctgattcccgcggctttgcaggatctttggcgacaacgcctttacccattgagtggtttg
gaattccgggtttttctggaggactggaaagatttctcccgtttttctcaacgcatccag
aaagatctcccaaaaaacaccctcccgctctggtcgacggaaagcgtcagcattaacgcc
atcgcctggactgaaaagcaccatgcaatgacccatgagttgaaaaccctgcgcacgctc
tggcgtccccgcatcgaaatcctatgtgcctggctcgacggccaactcccgcccagtcaa
cccgacacccctttcaatcaaaaaaccttcaagggggaaacagtacgtcagtggtgcgcc
cgtttactccactggtgcgaggaaaacggcccggccgatccctgtctgacggaggaccag
tgggacaaacttacgctcaacggactccaggcacaagtcaagaaaaattttcagatcgat
cccccggcgctttttgacgaactccatgacttccgcacagccttgcaaaacctgaaagac
caaaggaagcatttgcatgacctcatggtggaaggtgtcgccctgcgccttgcccagcac
aaggcccaggtcctgcgccagaacttcaccgatatccagcaacgtctcgaccaggctctg
cagggaccgcaaggagaggccctggtcacaagtctgcgcctgcgctatcccgttgccctg
atcgacgaatttcaagatacttcgatgcgccaactgcgcatgctggaccggatttacgat
ctgaatgccaatgcctcggaacgggggatctttttgatcggtgatcccaaacaatccatt
tatggtttccgcgacgcagatattcagagttacctcaaagcccgtgcgtccgtagcgccc
cgtcattacctcctgaccaccaatcatcgttcggtggctcccgtcgtcgaactcatcaat
agactcttcgaaggcgccgaacaacgggtcggacccggggccttccgctttcgtgcaaag
gatgatgctcccttgccgttccaccccgtacaggcccgtggacgggatgaacagttgctc
tgtgacgggcggccccagcctgccctcacggtggcctggaccacggaaccggataaccgg
gggcaattattcgaacgcatggcagaacattgtgcggaacatttgggtagacttctaacc
tccgccgccggtttttacaccagcggcctccaggcccttcttcgccccgctgatctggcc
atactggtgcgcgaccgtcatgaagccgctgcggtgaaaagtgccctggaacgacgaaac
attccctcggtctatctgtctgaccgaagtcacctgctggactctgcggaaaccccggac
atccttctctggctccagtccgtggctcatccccgcaacccccgccttctgcgggcggcc
ctgggcaccagcaccctgggattctccctggctgaactggaacaatgggccaggtcggaa
accgcctttgaagagatattgaatttctggatggaactgcaccactgctggcagcgacag
ggagttttatccatgctgcagcgcctgctccatcatttctttctgccagcccgctggtta
caggaaaaagacggagagcgtcgtctcacccaggtcctccatctggcggaattcctgcaa
cgcaccagcgcccatctcgaaggcccggaagccctgatccagtggctgatccacgagctt
cagacccccacctcgagcccggaagaattacgtctggaaagtgatgcggaccgggtccgt
atcatcaccatccataaagccaagggcctggaatttcctgtagtctatcttccctttgct
acctgtttcaaaccccaacccgaagccgaggaaaagcgcctccaggaagatatccgcctg
ctttatgtggccttgacccgtgcccagcacgccctgtggatcggggtttcgcccttcaaa
tataaaaccagcggcccgctgttctccgccagtgccctaggttggttgttgggggccacc
ccgggcgctcctgccgaagaactgttgcccctgctccaggaaacctggaaaagtcttccg
gaggtgcacttcacggaagccagtctaccgttgtcagtcacgggcttcatccccccgcct
gccccagcgttgcgccctgcctccctggtcacaggccccttcgatcgcgcctgggccatt
cacagtttttcttccctcacccgttccctggcatttgtgttgcctgattcacccactgca
caacaaaacccgcctcttcccggtaccagcccacgccaccgttttccacgcggggcctgg
gccgggaaatttctgcatgaacagttggcctgggctgccgagcgccgttttaccttcgat
accgaccccacattgaatcttcagttacatcaacgctgccttcgtcaaggctgggaaact
catgccgctgacctcgagcagtggttacaggaaatcgccctgacccccattgcccccagt
ggagtggccctgcgtgcacttccccatactttccaggaaatggagttctggtttccgctc
cagaccacccataccgaagaactggatgacttttgccaaacccgtttctggcctggtcac
cctcgcccccccctcacggcacggacactgaaaggattgatgatggggtttgccgatctg
gtcttcctctgggaggatcgtttctgggtattggactacaaatccaatgccctgggggaa
aatgatgccgcctatacccgcacggctctggagcaggccgtgctcactcatcgctatgag
gtacaactggcgctttatctattggccttgcaccgccttctgaaagtgcgtctgggatcc
acctatatcccccgccagcacctgggcggcggcatcgacctcttcctgcggggtatccag
ggaccggagcgcgggagcctgctcctcgaatctccccatgagtggattgaaacgctcgat
gccttgctcacccccgcgtttcctggaatctcttcatga
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