Ferrovum myxofaciens: HO273_06555
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Entry
HO273_06555 CDS
T06614
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fmy
Ferrovum myxofaciens
Pathway
fmy03030
DNA replication
fmy03410
Base excision repair
fmy03420
Nucleotide excision repair
fmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HO273_06555 (polA)
03410 Base excision repair
HO273_06555 (polA)
03420 Nucleotide excision repair
HO273_06555 (polA)
03440 Homologous recombination
HO273_06555 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmy03032
]
HO273_06555 (polA)
03400 DNA repair and recombination proteins [BR:
fmy03400
]
HO273_06555 (polA)
Enzymes [BR:
fmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HO273_06555 (polA)
DNA replication proteins [BR:
fmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HO273_06555 (polA)
DNA repair and recombination proteins [BR:
fmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HO273_06555 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HO273_06555 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKE38431
LinkDB
All DBs
Position
1439337..1442060
Genome browser
AA seq
907 aa
AA seq
DB search
MSEEKRPHLVLVDGSSYLYRAFHALPDLRNRQGEPTGALYGVLNMLARLKEDYKPDHVAC
VFDAPGPTFRHQAFPDYKAQRPAMPTDLVSQIAPLHQAIRALGWPLLQESGVEADDVIAT
LTHQARVLGWEVTISSGDKDLIQLLAEGVALINTLSNERLDVARATEKYGVTPAQFVDYL
TLVGDTADNVPGVPKVGPKTAAKWIQQFGTLEDLMAHAEEIGGVVGNHLRQSLDWLPQAR
FLITLKSAVPLSESPETLVWQTPDETALAVLAERYDLKRWKNPAPRIRTDTLAPLPPPAP
VLEPRPEVHYETLLTSAQLEHWLNQLECAELTAFDTETTGLDPLQDTLVGLSFCCDGLHA
AYLPLAHQTLDASPQLPFEETLQRLRPWLENPAAAKVGQHLKYDTHILANHGIALRGIRH
DTLLQSYLLEAHQPHGLESLARRHLGRETLSYETVTGKGANAIGFAQVALDQATIYAAED
AEVTLAVHKVLYPQLCAEPRLLELYETLELPVQQVLWRMERYGVLLDAAVLIEQSAELSG
QLIALENQAHLLAGQPFNLNSSKQVQTLLFETLGLPVLKKTPGGQPSSDESVLEQLALDF
PLPKLLLDYRTLAKLKSTYTDALPKRINPRTGRVHTHFAQAVAVTGRLSSSDPNLQNIPI
RTAAGRRIRAAFIAPPGHVLMAADYSQIELRLMAHLSEDSGLLNAFAQGLDVHRSTAAEL
FAVAVDQVSADQRRAAKAINFGLIYGMSAFGLARQLNLTRSAAQHYMERYFQRYPGVARY
MEKTREQAREKGYVETLFGRRLFLPELKNSGAGRRQAAERAAINAPLQGTAADLIKRAML
AVQNWLDETRSQSRLILQVHDELILEVPEDEVSLLRIHLTRLMEGVASLRVPLSVEVGTG
KNWDEAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaaaacgcccccatctggtgctggtggacgggtcatcgtacctttaccgc
gcctttcatgccttgcccgacctgcgcaaccgccagggagaacccaccggcgcgttatac
ggcgtactgaacatgctggcccgactgaaggaggattataagccggatcatgtggcctgc
gtgttcgacgctcccggccccaccttccgccatcaggcctttccggactacaaggcacag
cgccccgccatgccaaccgacctggttagccaaatcgctcccctgcatcaggccatccgc
gccctgggttggcctctccttcaggaatccggggtggaagcggacgatgtcattgccacc
ctcacccaccaggcccgagtattgggctgggaggtgaccatttccagcggcgacaaagat
ttgattcagttactggcggagggggttgccctgatcaataccctctccaacgaacgtctg
gatgtagcccgggccactgaaaagtatggggtgacccctgcccaattcgtggattacctg
accttggtgggcgatacggcggacaatgttcccggcgttcccaaagtcggtcccaaaacc
gccgccaaatggatccagcagttcggcacactggaggacctgatggcccacgccgaggaa
atcggtggcgttgtgggcaatcatctgcgtcaaagcctcgactggttgccccaggcccgc
tttctgatcaccctcaagtccgcagtcccactctccgaatccccggaaaccctggtgtgg
caaacgcccgatgagaccgcactggcggttctggcagagcgctatgacctcaaacgctgg
aaaaaccctgccccccggatcaggaccgacacccttgccccgcttcccccacctgcgccc
gtcctggaaccacgtcctgaagtgcattacgaaaccctgctgacttccgcgcaactggag
cattggctgaaccaactggaatgcgccgaactgactgccttcgatacggaaaccaccgga
ctcgatccgctacaggacactttagtgggcctctctttctgttgcgacggcctccatgct
gcttatttgcccctggcccaccagactttggatgcctctccccaacttcctttcgaagaa
accctccagcgtctgcgcccctggcttgaaaacccggcggcggccaaggtgggacaacac
ctcaaatacgacacccacattctggccaatcatggcattgccctgcgcggcatccgccac
gacaccctgcttcagtcctatctgctcgaggcccaccaaccccatggcctggaaagtctg
gcacgccgccacctgggccgggagaccctgtcttatgagacggtgaccggcaagggggcc
aatgccatcggcttcgcacaggtcgcgctggatcaggccacgatctatgctgcagaagat
gcggaagtcactctggcggtgcacaaggttctgtatcctcaactctgtgccgaaccccgt
ctcctcgagttgtatgaaacactggaactgccggtacagcaagtcctgtggcgcatggag
cggtatggagtgctgctggacgcggctgttttgattgagcagagtgccgagttatccggg
caactcattgcgctcgaaaatcaggcccatctcctggcaggacaacccttcaatctcaac
tcctccaaacaggttcaaaccctgctgttcgagactcttggattgcctgtgctcaagaaa
actcccggagggcagccttcctctgatgaaagtgtgctggagcaactggcgctcgatttt
cccctccccaagttgctgctggactatcgaactctggccaaactcaagtccacctacacc
gatgctctgcccaaacggatcaacccccgaacggggcgagtgcatacccattttgcccaa
gcggtagcggtgaccggacgcctctccagcagtgatcccaatttgcaaaacatacccatt
cgcacagccgccggacgacgcatccgggccgctttcattgccccccccgggcatgtactc
atggcggcggattattcccagatcgaattgcgcctcatggcccatctgtccgaggattcc
ggactgctgaatgcctttgcccaaggactggacgtgcatcgatccaccgccgccgaactc
tttgccgtggcggtggatcaagtcagcgcagatcagcgccgcgccgccaaagccattaac
tttgggctgatctacgggatgtcagccttcggtctggcccggcagctcaacctcacccgc
tccgccgcccaacattacatggaacgctattttcaacgctatcctggggtggcccggtac
atggagaaaactcgtgagcaggcacgggaaaaagggtacgtggaaacccttttcggacgc
cgcttgttcctgcccgaactcaaaaactcgggagccggacggcgtcaagccgccgaacga
gccgccatcaacgcccctcttcaggggaccgctgccgatctgatcaagcgcgccatgctg
gcagtacagaactggctggatgaaacccggagccagagccgtctgatcctacaggttcac
gacgaattgattctggaagtccctgaggatgaagtttccctgctgcggatccacctcacc
cgcctcatggagggggtcgcctccctgcgggtgcctttgagcgtagaggtggggacagga
aagaactgggatgaagcccactaa
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