Ferrovum myxofaciens: HO273_08040
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Entry
HO273_08040 CDS
T06614
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fmy
Ferrovum myxofaciens
Pathway
fmy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HO273_08040 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fmy03400
]
HO273_08040 (xth)
Enzymes [BR:
fmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HO273_08040 (xth)
DNA repair and recombination proteins [BR:
fmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HO273_08040 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QKE38684
LinkDB
All DBs
Position
complement(1723206..1724027)
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AA seq
273 aa
AA seq
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MKIATWNVNSIRVRLSHVLAWLEKEKPDVLCLQELKCEAPDFPWEAFRAVGYHAHVAGQK
TYNGVALVSLQPGVDEVIGLPQWEDPQRRVIAATFGDVRVISVYCPNGESLSSEKYVYKL
AWFDALHDYLQDSLVRYPCLLVAGDYNIAPEDRDIHDPAAWAGEVLCSPPEREKFQALEA
LGLVDCFRQFPQEERSFSWWHYRVNAFKRNLGLRIDHLLASQRLGATLRSCTIDRDPRGW
ERPSDHTPVWATFEAAPVPYSGAEPKSLSSPRA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattgcgacgtggaatgtcaattccatccgggtgcggctgtcccatgtgctggct
tggttggagaaagaaaaaccggatgttctttgcctgcaggagctcaagtgtgaggccccg
gattttccttgggaagcatttcgagcggtgggttatcacgctcatgtggcgggacagaaa
acctataatggagtggcgttggtttccttacaacccggggtggatgaggtgatcgggttg
cctcaatgggaagatccccagcgacgggtcattgccgccacatttggcgacgttcgggtg
atcagtgtgtattgtcccaatggcgaatcgctcagttcggaaaagtacgtttacaaactt
gcctggttcgatgcactgcatgattatttgcaggacagtctggtgcgctatccctgtctg
ctcgtggcaggagattacaacattgcgccggaagaccgggacattcatgatccggcggcc
tgggccggggaagtgttgtgcagtcctcccgagcgggagaagttccaggcattggaggcc
ttggggttggtggattgctttcggcaatttcctcaggaggagcgatccttcagttggtgg
cattaccgggtcaatgcgttcaagcgcaatttggggttgcgcattgatcatttgctggcc
agtcaaagactgggtgctaccctgcgttcctgtaccatcgatcgggacccacgcgggtgg
gaacgtccttccgatcatactcccgtgtgggcaacatttgaggcagcgcctgtgccctat
tcaggagccgaacccaaaagtttatccagtcccagagcgtga
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