Ferrovum myxofaciens: HO273_11755
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Entry
HO273_11755 CDS
T06614
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fmy
Ferrovum myxofaciens
Pathway
fmy03030
DNA replication
fmy03430
Mismatch repair
fmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HO273_11755 (dnaE)
03430 Mismatch repair
HO273_11755 (dnaE)
03440 Homologous recombination
HO273_11755 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fmy03032
]
HO273_11755 (dnaE)
03400 DNA repair and recombination proteins [BR:
fmy03400
]
HO273_11755 (dnaE)
Enzymes [BR:
fmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HO273_11755 (dnaE)
DNA replication proteins [BR:
fmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HO273_11755 (dnaE)
DNA repair and recombination proteins [BR:
fmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HO273_11755 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Fox-1_C
Motif
Other DBs
NCBI-ProteinID:
QKE39301
LinkDB
All DBs
Position
complement(2459769..2463230)
Genome browser
AA seq
1153 aa
AA seq
DB search
MSAPPFIHLRLHSEFSISDGLVRIDEAVELARSLNMGALALTDLNNLFGWVRFYLQARKA
GLKPIAGAEVWIASDEDHPHPFRIVLLARTLPGYHTLCRLLSAAWREHQAQGIAYVPLAL
LAQEKEGLLVLSGADQGDVGQALSAGQWDLARERALAWKTRWGDDYYLELQRIGDPMRDR
LCEPTVQLAAELDIPVVATHPIQFPAREDFKAHEARVCIAEGRLLADPKRPRLFTPEQYF
KSPDEMAELFRDIPAALANSVEIARRCSLELTLGKPRLPDFPTPDGITLDDFLRQQAHEG
LERRLAQLYPDETLRQKETATYRERLDFECQTIVQMGFPGYFLIVADFINWSKHHGVPVG
PGRGSGAGSLVAFSLGITDIDPLRYDLLFERFLNPERVSMPDFDIDFCQDGRDRVIDYVR
ERYGRDSVAQIATFGTMAAKAVIRDVGRVLDLPYNFVDQLAKLIPFEIGMTLAKAREQEP
QINQRAAQEEEVAELLTLAESLEGLTRNVGMHAGGVLIAPGKLTDFTPLYQPEGSEAVVS
QYDKDDVEKVGLVKFDFLGLRTLTILDWAVRHIQERARTPEERHFTVEQIPLDDSKTYAL
FGSGNTTAVFQQESRTAKDMEKRLKPDNFEDIIALMALNRPGPLQSGMVDDFILRKQGKA
VAEYFHQSLEPVLRPTYGVIVYQEQVMQIAQILAGYTLGAADLLRRAMGKKDAVEMGRQR
SRFIEGATTRGVGVKLATQLFDLMEKFAEYGFNKSHSAAYALISYQTAWLKTHYPAEFMA
ATLSGDLDDTDKVALFVADAQQNGLVILPPDINTSDYRFRPAGEKTIRYGLGSVKGTGEG
AALEILRQRSGSPPEPYRSLFDFCRRTDKRSVNRRVIEALIKAGAFDTLHPNRAAALNAV
ESALNHGEQAQRHALQEGLFDALAESASKDPPLPPHPEWSPNEQLTQEKSVLGYYFSGHP
FTHYRPQLQHWGLTPLDQLAPRAELIRVAGVVVQSRVQQTRRGRMGMVTLDDGSARVEIT
VFSELFDQVRPLLKEDRLLVVEGKATLDNFTQGVRLTAEQVLSLPQAQTRFARQITLEVS
HSQSAKTLALLKELKPSFQPGSCAFVLRYCRPEVEASLRLPDFQLDEALWDLFRARFGET
ALTLDYGNRPTNE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcctcctttcatccatctgcgcctgcacagcgaattctccatttctgacggc
ctggtgcgcatcgacgaagccgtggaactggcgcgctccctgaatatgggggccctggcc
ctgaccgatctcaacaatctgttcggctgggttcgtttctacctgcaggcccgcaaggcc
ggcctcaaacccattgccggcgcggaagtctggatcgcttcggacgaagaccacccccat
cctttccggatcgtcttgctggcacgcacgctccccggctaccacacgctctgtcgcctg
ctgtcggcagcctggcgcgaacatcaggcacagggcattgcttatgtgccccttgccctg
ctggcccaggaaaaagaaggacttctggtcctctccggggcggaccagggagatgtgggt
caagccctgagtgcggggcagtgggacctggcccgggaacgggccctggcctggaaaacc
cggtggggggatgactactatctggaacttcagcggatcggcgacccgatgcgcgaccga
ctctgcgaacccacggtccaactggctgctgaactggatattcccgtggtcgccacccac
cccatccagtttcccgcacgagaggatttcaaggcccatgaagcccgcgtgtgtatcgcg
gaaggtcgcctgctggcagatccaaaacgcccgcgtctttttaccccggagcagtatttc
aagtccccggacgaaatggccgaactgtttcgtgacattcctgcagcccttgccaactcg
gtggaaattgcacgccgctgttctctggaattgacgctggggaagccccgtcttcccgat
ttccccacccccgacggcatcaccctcgacgattttctgcgccagcaggcccacgagggc
ctggaacgccgcctggcacaactgtatcccgatgaaaccctgcgccaaaaagaaaccgcc
acctatcgggaacgtctggatttcgagtgccagaccatcgttcagatgggatttcccggc
tatttcctgatcgtggcagactttatcaactggtccaaacatcatggcgtgccggtgggc
cctggacggggatcgggggcaggatcactggtcgctttcagcctggggatcaccgatatc
gatcccttgcggtatgacctgctcttcgagcgcttcctcaacccggaacgggtatccatg
cctgactttgatatcgatttctgtcaggacggacgggaccgggtcatcgactatgtcagg
gaacgctacggacgggattctgtagcccagatcgccaccttcggtaccatggcggccaag
gccgtgattcgggatgtcggacgggtactggatctaccctataattttgtggaccaactg
gccaagctgatccccttcgaaattggcatgaccctggccaaggcccgggaacaggaaccc
cagatcaaccagcgcgctgcccaggaagaagaggtcgccgaattgctgaccctggccgaa
tccttggaaggtctcacgcgcaatgtcggcatgcacgcgggaggcgtgctgattgccccc
ggcaaattgactgacttcaccccgctctaccagcccgaaggttcggaagccgtagtcagt
caatacgacaaggacgatgtggaaaaggttggcctggtcaagttcgactttttggggttg
cgcaccctcaccattctcgattgggcggtgcgccatatccaggaacgggcgcgcaccccc
gaggaacggcacttcacggtagaacagattcccctggacgattccaaaacctatgcgctc
ttcggcagtggcaacaccaccgccgtcttccagcaagaatcgcgcacagccaaggatatg
gaaaaacggctcaaacccgacaactttgaggacatcatcgccctgatggccttgaatcgt
ccggggccgctccagtccggcatggtggatgacttcattctgcgcaaacagggcaaggcc
gtcgccgaatatttccaccaatccctggaaccggttttacgccccacctacggagtcatc
gtctatcaggagcaggtgatgcagatcgcccagatcctggcaggctataccctgggggcc
gccgatctgttacgtcgcgccatgggaaaaaaggatgcggtggaaatgggtcggcagcgc
agtcgtttcatcgaaggagccaccacccgtggagtcggtgtcaagttggccacccaactc
ttcgatctgatggaaaagtttgccgaatatgggttcaacaaatcccattcggccgcctat
gccctgatttcctatcagaccgcttggctcaagacccattaccctgccgaattcatggcc
gccaccctgtccggagatctggacgacaccgacaaggtcgcgctcttcgtggccgatgct
cagcaaaatggattggtcattctgcccccggacatcaatacgtcggattaccgttttcgt
cccgccggggaaaaaaccatccggtatggcctcggctcggtcaagggtacgggggaaggg
gcggctcttgaaatcctcaggcaacgcagtggctccccccctgaaccctatcgaagtttg
tttgatttctgccggcggacggacaaacgcagcgtcaatcgtcgggtcatcgaagccttg
atcaaggcgggagccttcgataccctgcaccccaaccgcgccgccgccctcaatgctgtg
gaatctgctctcaatcatggggaacaggcccagcgtcatgccctgcaagaaggtctgttt
gatgcgctggcagaatcggcctcgaaggaccctcccctgcccccccatcccgagtggtca
cccaacgagcaactgacccaggaaaaatccgtgctgggctattacttcagcggtcacccc
tttacgcactaccgtccccaactccagcactggggattgacccctctggatcagttggcc
ccccgtgccgagttgattcgggtggccggagtggtggtacagagcagggtccagcaaacc
cggcgcggacgcatgggaatggttaccctggatgatggttcggcccgtgtggaaatcacc
gtattcagtgaattatttgatcaggtacggcccctgctcaaggaagatcgactgctggtg
gtggagggtaaggcaaccctggacaacttcacccagggggtgcgactcaccgccgaacag
gtcctgtccctaccccaggcccagactcgctttgcgcgccagattaccctggaagtttcc
cacagccaaagcgcaaaaacccttgctctcctgaaagaactgaagccttccttccagccc
ggttcctgtgcttttgtgctgcgctactgccgtcccgaggtggaggcttccctccgtctg
cctgactttcaactggatgaagccttatgggatctgttccgtgcacgctttggcgagacc
gccttgaccctcgattatggaaatcgcccgaccaacgaatga
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