Ferrovum myxofaciens: HO273_13300
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Entry
HO273_13300 CDS
T06614
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
fmy
Ferrovum myxofaciens
Pathway
fmy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HO273_13300 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fmy03000
]
HO273_13300 (nifA)
Transcription factors [BR:
fmy03000
]
Prokaryotic type
Helix-turn-helix
Other families
HO273_13300 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
HTH_8
GAF_3
Mg_chelatase
AAA_2
AAA
AAA_16
bpMoxR
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKE39877
LinkDB
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Position
2739919..2741532
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AA seq
537 aa
AA seq
DB search
MTKVMRKEGNLELVTIYEISKVLGSSLNLQKTLREVLNLLASHLRMDRCMVALLQEDNIL
HVIGASGMTETEVKRGFFRIGEGVMGKVVKSGMTIVVPDISKEPNFLHKTGPRTIQEGEV
ISFIGVPIKVGRESIGVLGVDRHLNGEPQNFQSDSRFLSMVANLIGQTVRLHQSISKERQ
QLLMEKSRLQKELHGKYSLDNVIGVSKLMQEVFSEVHQAAPGKSTILLRGESGTGKEVIA
RSIHYMSPRKDRPFIKVNCAALSETLLESELFGHEKGSFTGATQDRKGRFEMANGGTLFL
DEIGDISPSFQTKLLRVLQEREFERVGGNKPIQVDIRLITATNKNLEQAVSKGEFRADLY
YRINVVSIFLPPLRERREDIPLLVSSFLEKFNVENQKNLSFSTDAMKIMLECYWPGNVRE
LENCVERTLTMTRGSVIREHDLPCQQDKCFSVTLRSYVQPAKPVIPIIPRHDTDMPMNDD
HSEAEVPSKEFGTERDRLIWAMEQCGWVQAKAARLLKLTSRQMGYALQKHKIEIKRF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaagtgatgcgaaaagagggaaacctcgaactggttacgatctacgagatcagt
aaggtgctcggttcgtctttgaacctgcaaaaaacgttgagagaagtcctcaatcttctg
gcatcccatctcaggatggaccgttgcatggtggcattgttgcaggaggataacatcctg
cacgttattggtgcatcggggatgactgaaacagaggtcaagagaggatttttcaggatt
ggcgaaggcgttatggggaaagtagtgaagtcggggatgaccattgtcgttccagatatt
tcaaaagaacccaactttcttcataagacagggcctcgtacgattcaggaaggcgaggtc
atttcatttatcggggttcctatcaaggtaggtcgtgagtccattggcgtgctgggcgtg
gatcgccacctcaatggagagcctcagaatttccagagtgattcgagatttttatcgatg
gtggctaatttaatcggacagactgtcaggttgcaccaaagtatttccaaggagagacaa
caactcctgatggaaaaaagccggctccagaaagaattgcacggcaaatacagtctcgac
aatgtcatcggggtcagcaaattgatgcaggaggtattttccgaggtgcaccaggccgca
cccggaaaatcaaccattctgctacggggcgagagtgggacagggaaggaagtcattgcc
cgttcgatccattatatgagcccccgaaaagacaggccgttcatcaaggttaattgtgca
gcactttctgagaccttgctggagtctgaactttttggtcacgaaaaaggttccttcacg
ggagcgactcaggatcgtaaaggacgttttgaaatggctaatgggggtaccctgtttttg
gatgaaattggcgatatttctcccagttttcagaccaagttgctcagggtcctgcaagag
cgtgagtttgaacgggttggaggtaataaaccgattcaggtcgatatccgattgattacg
gcaaccaataagaatcttgagcaggcagtttctaaaggcgaattccgcgcagatctgtat
taccgcattaatgtagtcagtatttttttgcctccacttcgagaacggcgcgaagatatt
ccgctgctggtttcatcttttcttgaaaaatttaatgtggaaaaccaaaaaaacctttcc
ttctccacagacgccatgaaaatcatgcttgagtgctactggcctggaaatgttcgggaa
ctcgagaactgtgttgaaagaacattgaccatgacccggggttcagtcatcagggagcac
gatttgccttgccaacaagataaatgtttttcggtaacgctacggagttatgtccagccg
gctaaaccagtgattcccatcatacccagacatgacactgatatgccaatgaacgatgat
cattccgaagcagaagttccttctaaagaatttggcacggaacgtgatcgattgatttgg
gcaatggaacagtgtggttgggtccaagctaaggcggctcgacttctcaagttgacctct
cgtcaaatgggctacgcattacagaaacataaaattgaaatcaaacgattttag
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