Francisella orientalis Toba 04: OOM_0111
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Entry
OOM_0111 CDS
T02112
Name
(GenBank) ribonuclease II family protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fna
Francisella orientalis Toba 04
Brite
KEGG Orthology (KO) [BR:
fna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fna03016
]
OOM_0111
Enzymes [BR:
fna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
OOM_0111
Transfer RNA biogenesis [BR:
fna03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OOM_0111
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
FAD_syn
TetR_C_19
Motif
Other DBs
NCBI-ProteinID:
AFJ42673
LinkDB
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Position
104684..106558
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AA seq
624 aa
AA seq
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MLLENQSIKNALVIFKSKPAKVVEILDKKIEIETLDSKNIKLPAKNVQILTVLANDFDLA
KLEKLEIPELELTWELLQEQQQTSIDELRELLFEFVGANQAYTVWLLVSEGEYFSFNEDF
TINIHSQEQKDQIVSDKQEKLKKEQELNDFIECLNNKTFNIEDTKFLKEIEALATLKSTK
CRFFKYLNMEESENSAYKLLLDIGYWDEFFNPYLYRYGAELESNPAEFKYNSGSDSQRVD
LTHLTAYAIDDEGSNDPDDAISWDTQQNKMWVHIADPSSSINFGDEVDLEARARGSNLYV
PEHIITMLPPQATQKLGLGLQEVSPALSVGFRLNESSDIHDIEICFSNIKVTRYSYEFVE
ENISALELGDIGAYAKYFTNKRLTKGAVELDFPEIKISLDSDNNVKLTDLPRLNSRTLVR
DTMLMAGVAIGQFCKENNICVPFSTQPEHDLEQDDLENIDSIADMFATRKKLQRGKYSTE
PDVHAGMGLDSYVQVTSPLRRYLDLLVHYQLRNFLENKQMISVEDVDNIIAQVDIPIKSN
RQTERFSNSHWKLVYLMQNPNLEFQATVIEKLDKGRLMVSIADLAMTKKLAVSGKYDLND
QIKLQNTSVNLVTQEAFFKVIEEN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaaaatcagagcatcaaaaatgccttagtaatttttaaatcaaaacctgca
aaggttgtagagatattagataaaaaaatagaaatagaaactttagatagtaagaatata
aagttacctgcaaaaaatgtccaaatacttacagttttagcaaatgattttgatttggct
aaacttgagaaattagaaattcctgagttagagttaacatgggagttattacaagagcaa
caacaaacatcaattgatgagttaagagagcttctttttgaattcgtaggagctaatcaa
gcttatactgtatggcttttagtttctgagggagagtattttagctttaatgaagacttt
actattaatattcattcacaagagcaaaaagatcaaatagttagcgataaacaagagaag
ctcaaaaaagaacaagaactaaatgattttatagagtgtcttaataataaaacttttaat
atcgaagacacaaaatttcttaaagaaatagaggctttagcaacacttaaaagtacaaaa
tgtcgtttctttaaatacttaaatatggaagagtctgagaatagtgcgtataagttactc
ttggatattggttattgggatgaattttttaatccttatttatatcgatatggtgcggag
ttagaaagtaatcctgcggaatttaaatataattctgggtcagatagtcagcgtgtcgat
ctaacacatctgactgcttatgctatagatgatgagggtagtaatgatcctgatgatgcg
attagttgggatactcaacaaaataaaatgtgggttcatatagctgatccatcttctagc
ataaattttggcgatgaagtagatcttgaagctagagcgcgaggttctaatttatatgtg
ccagagcatataatcacaatgttgccacctcaagcaacacaaaagttaggtttaggccta
caagaagtttctccagctttgtcagtaggatttagacttaatgagtcaagtgatattcat
gatattgaaatatgttttagtaacataaaagttactagatattcttatgagttcgttgaa
gaaaatatctctgctctagagcttggagacataggggcttatgctaaatatttcactaat
aagcgtttgacaaagggagcagtagagcttgattttcctgagataaaaatatcattggat
agtgataataatgtcaaactaactgacttaccacgcttaaactcaagaacattggtacgt
gatactatgctaatggctggagtggctattggacagttttgtaaagaaaataatatttgt
gtacctttttcaacacaaccagagcatgatcttgagcaagatgatttagagaatattgac
tcaatagccgatatgtttgcaacacgtaaaaagctccaaagaggtaaatattctacagaa
cctgatgttcacgcaggtatggggttagactcttatgtacaagtgacaagtcctctaaga
agatatttagatttgcttgttcattaccaattacgtaatttcttagaaaataagcaaatg
attagtgttgaagatgtcgataatataattgctcaagtagatattcctattaagtcaaat
agacaaacggagcgtttttctaattcacattggaaattagtatatctaatgcagaatcct
aatttagagttccaagcaacggttatcgaaaaactagataaaggtcgtttaatggtttct
atcgcagatttagcaatgactaaaaaacttgcagttagtggcaagtatgatttaaatgat
caaataaaactacaaaacacctctgtaaaccttgttacacaagaggctttctttaaggtt
attgaagagaattaa
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