Francisella orientalis Toba 04: OOM_0146
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Entry
OOM_0146 CDS
T02112
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fna
Francisella orientalis Toba 04
Pathway
fna03030
DNA replication
fna03430
Mismatch repair
fna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OOM_0146
03430 Mismatch repair
OOM_0146
03440 Homologous recombination
OOM_0146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fna03032
]
OOM_0146
03400 DNA repair and recombination proteins [BR:
fna03400
]
OOM_0146
Enzymes [BR:
fna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OOM_0146
DNA replication proteins [BR:
fna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OOM_0146
DNA repair and recombination proteins [BR:
fna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OOM_0146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_14
AAA_5
Rad17
ResIII
AAA_18
AAA_30
AAA_2
nSTAND3
AAA_16
RCF1-5-like_lid
RsgA_GTPase
AAA_assoc_2
CDC37_C
DUF5996
AAA_19
TsaE
Trypan_PARP
VapE-like_dom
SKI
Glyco_tranf_2_5
Mg_chelatase
AAA_28
AAA_7
Bac_small_YrzI
Cdc6_lid
TFIIA
SSV1_D-63
Motif
Other DBs
NCBI-ProteinID:
AFJ42705
LinkDB
All DBs
Position
complement(138830..140503)
Genome browser
AA seq
557 aa
AA seq
DB search
MSYQALARKYRPQSFSEVAGQQHALNSLVHALETQKVHHAYLFTGTRGVGKTTLGRLLAK
CLNCKTGVTAEPCNKCENCLAINNNSFIDLIEIDAASRTGVEETKEILDNIQYMPSQGRY
KVYLIDEVHMLSKQSFNALLKTLEEPPEYVKFILATTDYHKIPVTILSRCIQLHLKHISQ
SDIKDQLKVVLNKENISSDEQSLDYIAYHAKGSLRDALSLLDKAISFCSGELKQAQIKQM
LGIIDSEEVYNIIEAIIENNPSAVLPAVKNLTLTESNADAVLDRIAEIWFACCIYSFTQS
LDAINDIDIDIINKVLDKISVEQAHFLYQLTITAKKDISLAPSFETGVTMAVLRLIAFQK
KNLTSNHSLTTTPKISSETKNDIKALKNALQPQPQPQPQPQPQPQPQPQPQPQPQRQFSE
SNSQNNTSEESLDKKWFNLLNAIKLKGFTKTLAFNSHLINETNDTFEIQLNEDAKKILEL
EPQSIAKLQSAISQHLDSLGFRLDIKNLPTSNNSNHKSPAEIKRENAIEKIHNDQNVKLI
RESLAIEIMDSDIILTN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaagcattagctcgtaaatatagaccacaatcattctcagaagttgcaggg
caacagcatgcacttaatagtctagtacatgctctagaaacacaaaaagttcatcatgcc
tatttatttacaggcactcgtggtgtaggtaaaacaacacttggtagattactagcaaaa
tgtctaaactgcaaaactggtgttacagcagaaccatgtaacaagtgcgaaaactgtctg
gcgattaataataatagttttatagatttgattgagattgatgctgcatcgcgcacagga
gtcgaagaaacaaaagaaattctagataatatccaatacatgccatctcaaggtcgctac
aaagtatatctaatagatgaagttcacatgttatccaaacagagctttaacgctttacta
aaaacattagaagagcctcctgaatatgtcaagtttatattggcaaccacagattatcat
aaaatacccgtcacaatactttcacgttgtattcaactacatctaaagcatatctcacaa
tcagatatcaaggatcagctaaaagtagttcttaataaagaaaatataagctctgatgaa
caatcactagactatatcgcataccatgcaaaaggtagccttagagatgctctaagttta
cttgataaagccataagcttttgtagtggtgaacttaagcaagcacaaattaaacaaatg
cttggaattatagatagtgaagaagtctataacattatcgaagctattatcgaaaataac
ccaagtgcagtattacctgctgtaaaaaatttaactcttacagaaagcaatgctgatgca
gtgctagatagaatcgctgagatatggtttgcttgttgtatttatagttttacacagtct
ctggatgctattaatgatattgatatagatattatcaataaggttcttgataaaatttct
gttgaacaagcacactttttataccaactaacaattactgctaaaaaagatatatcccta
gctcctagttttgaaactggtgtaacaatggctgtacttagactgatagccttccaaaaa
aaaaacttaactagtaatcattcattaactactactccgaagatctcttcagagacaaaa
aatgacattaaagctctaaagaatgctttacagccacagccacagccacagccacagcca
cagccacagccacagccacagccacagccacagccacagccacaaaggcagtttagcgaa
tctaacagtcaaaacaatacttcagaagaatctttggataaaaaatggtttaatctgcta
aatgcaatcaaactaaagggttttacaaagaccttagcatttaacagccacctaataaat
gaaactaatgacacatttgaaattcaacttaatgaagatgccaagaaaattcttgaactt
gaacctcaaagtatagcaaagctgcaatcagctattagtcagcatttagatagcctaggc
tttagactagatattaaaaatctaccaacttctaataactctaatcacaaatcccccgct
gaaattaagcgtgagaatgcaattgagaaaatccataatgatcaaaatgttaagctaatt
agagaatcattagcaatagaaataatggatagtgatattatcttaaccaactaa
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