Francisella orientalis Toba 04: OOM_0717
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Entry
OOM_0717 CDS
T02112
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
fna
Francisella orientalis Toba 04
Pathway
fna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OOM_0717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fna03400
]
OOM_0717
DNA repair and recombination proteins [BR:
fna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OOM_0717
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AFJ43209
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Position
complement(703293..705836)
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AA seq
847 aa
AA seq
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MKEVSNHTPMIQQYLKIKSQYPDILLFYRMGDFYELFFDDATNAVELLDITLTARGKSNG
ESIPMAGVPYHAAEGYIAKIVKKGLSVAICEQIGDPSTSKGPVERQVTRIITPATVSEEA
FLDSNQDSILVSIYEKNNKYHIAYTSYTQGKIHLVNTMKNLSDLKNQILKLSPQEIITNS
NNLIQKNIFNKPVKVLEEWYFSNFEAKKHIVDTFDNSFANNILNSYKKEQLTAIGSILAY
LTNTLKSIPKHISDIHLDEDQNILNIDSNSRNNLELDNNSKSSLLNIMDKCKTSLGSRLL
RRYFKNPTRDLNKIAFRHNVIKALKEQHHFLKVQDILSYINDIERIISRVALGTVKPKDL
VSFNSSLEQLPKLKNLLKEINTSEIININNHIHQIDELTELLNKAIVDNPPVTIRDGGAI
KHGFDQELDELRGLKDNSYDFLLKFETLQKQKIGINTLKVGYNRVHGYYIELSKQYADKV
PAEYIRRQTLKASERYITNELKAFEDKILSAKEKALAREKLIYDVLLNKVLEYYSQIQQT
AASIAKIDVLANFAERAIKLNLNQPKFNKTGKLDIKEVRHLAIEQNIDEPFIPNDTLLST
DTYTLEIITGPNMGGKSTYMRQVAQLIFLAYIGSYVPANYADICDIDTIYTRIGASDDIS
SGRSTFMVEMTETAYILNNATQKSLVIMDEIGRGTSTFDGLSLAKACAEKFAKIGALTLF
ATHYFELTELVNQYPNTKNIHFEAKEYKDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDV
LESAKKNLANLEKGQAKLNISDQPQQNLQLDQTTIQKNHIKERLETIDINSITPIEALNI
LFELKKL
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagtttcaaatcacacaccaatgatacagcagtatttgaaaattaaatctcaa
tatccggatatattactattttatcgaatgggtgacttttacgagcttttttttgatgat
gcaacaaacgctgtagagctactagacataaccctcactgctcgaggaaaatcaaatggt
gaatcaataccgatggctggtgtgccatatcacgctgcagaaggctatatcgccaaaatt
gtcaaaaaaggattatctgttgcgatatgcgagcaaataggagatccaagcacttcaaaa
ggtcctgttgaacgacaagttacacgtataataactccggcaacagtttctgaagaagcc
ttcttagatagtaaccaagatagcattctcgtaagtatctatgaaaaaaacaataaatat
cacatcgcgtatactagctatactcaaggcaaaattcatcttgtaaatacaatgaaaaat
ttatctgatctaaaaaatcagatattaaagctctctcctcaagagataattaccaactct
aataaccttatccaaaagaatatttttaacaaaccagtaaaggttttggaagaatggtat
tttagtaattttgaggcaaaaaagcatatagtagacacctttgataacagttttgcaaat
aacattctaaactcatataaaaaagaacaactaacagctatcggatcaatacttgcttat
ttaacaaatacacttaaaagtattcctaaacacatttcagacatccatctagatgaagat
caaaacatactaaacatagatagtaatagtagaaataatttagagctagataataattca
aaaagtagccttctaaacataatggataaatgtaaaactagtttaggcagtagacttcta
aggagatacttcaaaaaccctactagagatctaaataaaatagctttccgtcataatgtt
ataaaagcattaaaggaacaacaccatttcttaaaagttcaggatattctgtcttatata
aatgacattgaaaggataatttctcgcgttgctctaggaacagtaaaacctaaagatcta
gtatcttttaatagctctctcgagcaactacctaaactcaagaatctacttaaagaaata
aacacctctgaaattataaatataaataatcacatccatcaaattgatgaactaacagaa
ctactaaacaaggctattgtagataatcccccagtgaccattcgcgatggtggcgccata
aaacatggtttcgaccaagagcttgatgagttaagaggactaaaagacaactcttacgat
tttttattaaaatttgaaactctacaaaaacaaaaaatagggattaatacactaaaagtt
ggttataaccgtgtgcatggttattacattgaactctcgaaacaatatgctgacaaagtc
ccagctgagtatatcagacgccaaacattaaaagctagtgagcgctatattactaatgag
ctaaaagcttttgaagataagattctctcagcaaaagaaaaagctttagctagagaaaag
cttatctacgatgtcctattgaataaagtcttagaatactactctcaaatccaacagact
gcagcaagtattgcaaaaatagatgttttagcaaactttgcagaaagagctatcaaacta
aacctaaatcaacctaaattcaataaaactggtaagttagatataaaagaggttcgtcat
ctagcgatcgagcaaaatattgatgaaccttttatacccaatgataccctattaagtaca
gacacttatacattagaaataatcactggacctaacatgggtggtaaatccacatatatg
cgtcaagttgcccaacttatctttctagcatatataggctcatatgtgccggctaactat
gcggatatttgcgatatagacaccatatatactcggattggtgcctcagatgacatatct
agtggcagatccacattcatggttgaaatgactgaaacagcttacattcttaacaatgct
actcaaaagtctctagtaatcatggatgaaatcggtagaggtacaagtacttttgatggt
ttatcacttgcaaaagcttgtgcagaaaaatttgcaaaaattggtgcattgactcttttt
gctacgcactactttgagcttacagagttagttaatcagtatccaaatacaaagaatatc
cattttgaagctaaagaatataaagacaatatctatttcatgcacaaagcagttgctggt
gcggctaaaaaatcctatggtattcaagtagctaaattagctggcatctcaaaagatgtt
ttagaatcagcaaagaaaaatctagctaatttagaaaaaggacaagctaaattaaatatc
tcagatcaaccccaacaaaatctccagcttgatcaaacaaccatacaaaaaaatcatatt
aaagagcgacttgaaacaatagatatcaactcaataacgcctatcgaggctctaaatata
ctctttgaactaaaaaagctctaa
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