Francisella orientalis Toba 04: OOM_0966
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Entry
OOM_0966 CDS
T02112
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
fna
Francisella orientalis Toba 04
Brite
KEGG Orthology (KO) [BR:
fna00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OOM_0966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fna03021
]
OOM_0966
Transcription machinery [BR:
fna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OOM_0966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
PspA_IM30
Arc_C
LSU
Motif
Other DBs
NCBI-ProteinID:
AFJ43430
LinkDB
All DBs
Position
complement(963436..965169)
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AA seq
577 aa
AA seq
DB search
MTREDLLSDLKDLMVDGKERGYLTRADILDALPGDVSEDPKKYEEIEAILIDAGIDVYDR
TPELDEDDERKVSEANLDDLKGKTSDPIRMYMREMGIVDLLDKKGETDIAIRIEEGTTEV
FSTILSYPIVVKTYIERFRELEEKAVDYIASQDIEDEPVAKYIRFNEIMAGFSDEQIAEE
KVAEDDHDEKIDTQRAYNFFTNLEKMFEEYQEKPNKKLYSKIVKEFESLRLSTSHLQKLV
DYIRLPYARVKEFERKILRLCVERSRTPRQEFIKVYEIGSVEWLLPLTKKYKFTDNTIKE
IHNLTKQINQFQSLMMMEIEELKKVNIEISKSEAKITQAKKEMIEANLRLVVSEAKKYTN
RGLHFLDIIQEGNIGLMKAVDKFDYRKGFKFSTYATWWIRQAITRSIADQARTIRVPVHM
IETINKVNRIKRQILQEKGREATEEEIIEYTPNMTKDKLKKILNISHTPISMESPIGDDE
DSTVGDFIEDKNNYSPIEAANLENLREAIKELIDTGLTEREAKVLMMRFGIGMNTDHTLE
EVGKQFNVTRERIRQIEAKALRKLKHPSRSTFLKTFL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagaagatttactttctgatctaaaagatcttatggttgatggtaaagaaaga
ggctatttaactagagcagatattttagatgcattgccaggagatgtgtcagaagatcca
aaaaaatatgaagaaatagaagctatcctcatagatgctggtattgatgtatatgataga
actcctgagttagatgaagatgatgaaagaaaagtaagcgaagcaaacttagatgattta
aaaggaaaaacatctgatcctattcgtatgtatatgcgtgaaatggggatagttgacctt
ttagataaaaaaggtgaaactgatattgctattaggatcgaagaaggtactactgaagtt
tttagtactattttgagttatccaatagttgtcaaaacttatattgagcgttttcgtgag
ttagaagagaaggcggttgattatatagcttctcaagatattgaagatgagccagttgct
aaatatattcgttttaatgaaattatggctgggtttagtgatgaacaaatagctgaagaa
aaagttgcagaagatgatcatgatgagaagattgatactcaaagggcttataatttcttc
acaaatcttgagaaaatgtttgaagagtatcaagagaagccaaacaaaaaactttatagc
aaaatagtcaaagagtttgaaagtttgagattgtctacttcccatttacagaaattagtt
gattatattaggcttccttatgcaagagttaaggagtttgagcgaaaaattcttagattg
tgtgtggaaagatcaagaactcctcgtcaagaattcataaaagtgtatgaaataggatct
gttgaatggctactaccattaactaaaaagtataaatttacagataatactattaaagaa
atccataatttaacaaaacaaattaatcaattccagagtctgatgatgatggaaattgaa
gagctcaagaaagttaatattgagatttctaaaagtgaagcaaaaattactcaagctaaa
aaggaaatgattgaagcaaatttgagattagttgtttctgaagctaaaaaatataccaat
agaggattgcatttcttagatatcattcaagaaggtaatatcggcttaatgaaagctgta
gataaatttgattatcgcaaaggttttaagttttcaacttatgcgacttggtggattcgc
caagcaattactcgctcaattgctgaccaggctagaacaattcgtgtacctgtacatatg
attgagactattaataaagttaatagaattaagcgtcaaattcttcaagaaaaaggtcgt
gaggctacagaggaggaaattatagaatatactccgaatatgactaaagataagcttaaa
aagattctcaatatatctcatactccaatctctatggaaagcccaattggtgatgatgaa
gattctacagttggtgattttattgaggataaaaataattattctccgatagaggctgca
aatttagaaaatctaagagaagcaattaaggagcttattgatactggtttaactgagaga
gaagcaaaggttcttatgatgcgatttggtattggtatgaatactgatcatactctagaa
gaggtaggcaagcagtttaatgttactagagagcgtattagacagattgaggcaaaagct
cttagaaaacttaagcatccatcaagatcgacatttttgaagacatttttataa
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