KEGG   Francisella orientalis Toba 04: OOM_0987
Entry
OOM_0987          CDS       T02112                                 
Name
(GenBank) UvrD/REP superfamily I DNA/RNA helicase
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
fna  Francisella orientalis Toba 04
Brite
KEGG Orthology (KO) [BR:fna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fna03400]
    OOM_0987
Enzymes [BR:fna01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OOM_0987
DNA repair and recombination proteins [BR:fna03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    OOM_0987
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Viral_helicase1 AAA_30 UvrD_C_2 Brr6_like_C_C AAA_11 AAA_12 DEAD
Other DBs
NCBI-ProteinID: AFJ43450
LinkDB
Position
complement(981742..983757)
AA seq 671 aa
MLNNLNQQQQQAVKYTSTPLLVLAGAGSGKTSVIIEKISYLIEQLLYPAKSIIAVTFTNK
AAKEMQERVKLRLDKEKSKGLMISTFHSLGLSILKRHFSDLGYKKNFTLFDSHDSLALIY
DIAYEEYQLPKQNAGFIQSKISFWKSVLLTPDEIQPKDDLEERAAFIYKEYQKYLKSYNS
FDFDDLVFQPIQLFKNFSSIQKLWSDKFRYILIDEYQDTNESQYQLLKYLTQDKNKFTVV
GDDDQSIYAWRGSRPENLRHLQEDFKDLKVIKLEQNYRSTGRILNVANKLIENNSHIFDK
KLWSNKDYGEQIKVISLTNDEDEAQFITSDIFFDRVKTKSKNSDYAILIRSNYQVYLLER
YMQMHKIPYTISGGSYFFSKSEIKDIISYLRLIVNPDDDRAFLRVVNIPKREVGSATIHK
LGEYTSEHHCSFFHTLYNLEKFEIRDFTKKNLSSFKDLILNTQQEINSSISAQELKNIIN
NFIDNISYRQWLIDSSSSEKQAEFRYANVKEVTKWIVNQLEGDSYNALESLASVLNKMLL
IDILDRDNEDKNDNQVQIITMHASKGLEFKKVYIMGMEEGILPHQQSIEEDSIEDERRLA
YVAITRARENLTITMTKHRKKFGEKHISIPSRFIDELPESDLYWVGTEKECAETRQQNSK
QNISALKDMFG
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgctaaataatcttaatcaacagcaacaacaagctgttaaatatactagcacaccttta
ttagtattagcgggggcaggcagtggcaaaactagtgtaattattgaaaagatttcttat
ctgatagagcaacttttgtatccagctaaaagtatcatagctgtaacatttacaaataaa
gcagccaaagaaatgcaagagcgtgttaaattacgacttgataaagaaaaatcaaaaggt
ttgatgatttcgacatttcactctcttggcttatcaattttaaaaagacatttttctgat
ttaggatataagaaaaattttacactttttgatagccatgattcacttgcactaatatac
gatattgcatatgaggaatatcagttgcccaaacaaaatgctggatttattcaatcaaaa
atatcattttggaagtcagttctacttacacctgatgaaatacaacctaaggatgacctt
gaagagcgagcggcttttatatacaaagaatatcaaaaatatctaaaatcttataactct
tttgactttgatgatctggtatttcaaccaatacagttatttaaaaatttctcaagcatt
caaaaattatggtcagataaatttagatatattctcatagatgaataccaagatactaat
gaatcacaatatcaacttttgaagtatttgacacaggacaaaaataaattcactgttgta
ggagacgatgatcagtctatatatgcatggagaggttctcgaccagaaaatttacgccat
ttgcaagaagatttcaaagatctaaaagttattaagttagaacaaaactatcgttccaca
ggtagaatacttaatgttgcaaataagcttattgaaaataatagccatatttttgacaaa
aaactttggtcaaacaaagattacggtgagcaaattaaggttattagtcttacaaacgat
gaagatgaggcacaattcataactagtgatattttctttgatagggtaaaaacaaaatct
aaaaactctgattatgcaatattgataaggagtaattaccaagtatacttacttgaaaga
tatatgcaaatgcacaaaatcccttatacaattagcgggggaagttattttttttccaaa
tcagaaatcaaagatattatttcgtatttaaggctaatagttaatcctgatgatgataga
gcatttttgcgtgtggtaaatattcctaaacgtgaagttggtagtgcaactattcataaa
ttaggagaatacacaagtgaacatcactgtagcttttttcatactttatataatttagaa
aagtttgaaatacgcgattttaccaaaaaaaacttatcatcttttaaagatttgatactt
aatacgcagcaggagataaattcaagtatatctgctcaagagctaaaaaatataattaat
aattttattgataatatttcataccgacagtggcttatagattctagctcctcagagaaa
caagcagagtttagatatgcgaatgtcaaagaggttactaaatggattgtcaatcagctt
gagggtgactcatataatgctcttgaatcgctagcttcagttcttaataaaatgttactt
atagatattttggatagagataacgaagataaaaatgataatcaggttcaaattataact
atgcatgcttccaaaggtttagaattcaaaaaagtttatataatgggtatggaagaagga
atcttgccacatcaacaaagtattgaagaggactctatagaggatgaacgtaggcttgca
tatgtggcgattactagagctagagaaaatttgactataacaatgacaaaacatcgtaaa
aagtttggcgaaaaacatatatctattccaagtagatttattgacgaattaccagaatct
gatctgtattgggtcggcacagaaaaagaatgtgcagaaactcgtcagcaaaattctaaa
cagaatatatccgcacttaaagatatgtttggataa

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