Fusobacterium vincentii 3_1_36A2: HMPREF0946_00122
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Entry
HMPREF0946_00122 CDS
T02822
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fnc
Fusobacterium vincentii 3_1_36A2
Pathway
fnc03420
Nucleotide excision repair
fnc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0946_00122
03430 Mismatch repair
HMPREF0946_00122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnc03400
]
HMPREF0946_00122
Enzymes [BR:
fnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0946_00122
DNA repair and recombination proteins [BR:
fnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0946_00122
MMR (mismatch excision repair)
Other MMR factors
HMPREF0946_00122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
CarD_TRCF_RID
PcrA_UvrD_tudor
DEAD
COG4_N
Motif
Other DBs
NCBI-ProteinID:
EEU32049
UniProt:
C7XMA2
LinkDB
All DBs
Position
845389..847602
Genome browser
AA seq
737 aa
AA seq
DB search
MNLNLLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVT
FTNKAAKEMRERVEELVGNIAKACTISTFHSFGMRLLRMYAKEVEYNSNFTIYDTDDQKR
IVKAILKGQNISLNGVKLTERDIVSMISKIKEEIKTLDEYSIMNKQIVEVYDKYNRVLLE
SNAMDFSDILLNTYKLLQKPEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLC
VVGDENQSIYGFRGANILNILNFETNYNNAKIIKLEENYRSTTTILDAANELIKNNKSSK
DKKLWTQNGKGDLIKVLACDNARDEVSRIIEIIKENHQNGIAYRDMTILYRTNAQSRVFE
EGLLRYSIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKVGEKGVE
KIIAYARENNLNLLEALSHIKEISGLTAVGKEKLLEMYDIIKELKDLSYTETASYIVQTL
IDKIKYIDYIKENYDDAEARIENIDEFKNSILELENVVGELRLNEYLENVSLISATDDLE
EKSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGSRAMFEEKEMEEERRLCYVALTRAEK
KLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIDIKKERLYFEDDYSNEIKAHDNSRK
FEKKKTEINTKNTIKFDDNSKKIIDNLGFKVGDKVKHKKFGLGVIKNIDAKKIYVQYVDG
TKEMAIILADKLLTKFE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgaacttattagaaaagttaaatgataagcaaagagaagcagcctcacaaatt
gatggttcaattttaattttagcaggagctggttctggaaaaacaagaacaattacatat
agaatagcacatatgatagaaaatgttggaattagcccttatagtattctagctgttaca
tttacaaataaggcagcaaaagaaatgagagaaagagttgaagagcttgttggaaatatt
gctaaggcttgtacaatttcgactttccattcatttggtatgagacttttaagaatgtat
gcaaaagaagtagaatacaattcaaatttcactatatatgacacagatgaccaaaaaaga
atagtaaaagctattttaaagggacaaaatataagtttaaatggagttaaactgacagaa
agagatattgtttctatgatttcaaaaataaaagaagaaataaaaactcttgatgaatat
tctataatgaataaacaaatagttgaagtatatgataaatataatagagtattattagaa
agcaatgctatggatttttcagatatacttttaaatacatataaattattacaaaaacct
gaaatacttgaaaaagttcaaaataagtataaatatataatgatagatgaatatcaagac
acaaataatttacaatataaaataatagatttaatagcaagaaaatcatctaatctatgt
gtagttggagatgaaaaccaaagtatttatggatttagaggagctaatattttgaatata
cttaactttgaaactaattataataatgctaaaattataaaattagaagaaaattataga
tctactactacaatattagatgcagcaaatgagttgataaaaaataataaatcatcaaaa
gataaaaaattatggacacaaaatggaaaaggagatttaataaaagttttagcttgtgat
aatgcaagagatgaagttagcaggataattgaaattataaaagaaaatcatcaaaatggt
atagcttacagagatatgactatactgtatagaactaatgcacaatcaagagtttttgaa
gagggacttttaagatatagtatccctcataaagtttttggaggtataagtttctattca
agagcagaaattaaagatataattgcatatttatctattattgttaatccacaagatgaa
ttaaatttacaaagaataatcaatgttcctaaaagaaaagtaggagaaaaaggagtagag
aaaataattgcttatgccagagaaaataacttaaatttacttgaagctctttctcatata
aaagagatttctggactaactgctgttggaaaagaaaaacttttagaaatgtatgatata
ataaaagaactaaaagatttatcttatacagaaacagcttcatatatagtacaaacttta
atagataaaataaaatatatagactatatcaaagaaaattatgatgatgcagaagcaaga
atagaaaatatagatgaatttaaaaattctatcttagagcttgaaaatgttgtaggagaa
ttgagattaaatgaatatttagaaaatgtatctttgataagtgcaacagacgatttagaa
gaaaaaagtgattatgtaaaattgatgactattcataactcaaaaggtttggaatttccg
atagttttcttagttggctttgaaaatgaaatctttccagggtcaagggcaatgtttgaa
gaaaaagaaatggaagaagaaagaaggctttgttatgttgctttaacaagagctgaaaag
aaactatatttatctcatgcaactataagatttgtatatgggcaagatagattgtcaaca
ccatcagtatttttaaaagaaataccagaaaaacttttagatattgatattaaaaaggaa
agactatattttgaagatgattattctaatgaaataaaagcccatgacaatagcagaaaa
tttgaaaagaaaaagactgaaataaatacaaaaaatactataaaatttgatgataatagt
aagaaaattattgataatttaggttttaaagtgggagataaagtaaaacataaaaagttt
ggtttaggtgtaattaaaaatatagatgctaaaaaaatatatgtacaatatgttgatgga
acaaaagaaatggctattatcttagcagataaacttttaactaaatttgaatag
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