Fusobacterium vincentii 3_1_36A2: HMPREF0946_00162
Help
Entry
HMPREF0946_00162 CDS
T02822
Name
(GenBank) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fnc
Fusobacterium vincentii 3_1_36A2
Pathway
fnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0946_00162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnc03019
]
HMPREF0946_00162
03110 Chaperones and folding catalysts [BR:
fnc03110
]
HMPREF0946_00162
03029 Mitochondrial biogenesis [BR:
fnc03029
]
HMPREF0946_00162
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fnc04147
]
HMPREF0946_00162
Enzymes [BR:
fnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF0946_00162
Messenger RNA biogenesis [BR:
fnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF0946_00162
Chaperones and folding catalysts [BR:
fnc03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF0946_00162
Mitochondrial biogenesis [BR:
fnc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF0946_00162
Exosome [BR:
fnc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF0946_00162
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0946_00162
Exosomal proteins of breast cancer cells
HMPREF0946_00162
Exosomal proteins of colorectal cancer cells
HMPREF0946_00162
Exosomal proteins of bladder cancer cells
HMPREF0946_00162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
EEU32089
UniProt:
C7XME2
LinkDB
All DBs
Position
complement(887977..889596)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIINFNDEARKKLEIGVNTLADAVKITLGPRGRNVVLEKSYGAPLITNDGVTIAKEIE
LEDPFENMGAALVKEVAIKSNDVAGDGTTTATILAQAIVKEGLKMLSAGANPVFLKKGIE
LAAKEAIEILRDKAKKIESNEEISQVASISAGDEEIGKLIAQAMAKVGETGVITVEEAKS
LETTLETVEGMQFDKGYVSPYMVTDSERMTAELDNPLILLTDKKISSMKELLPLLEQTVQ
MSKPVLIVADDIEGEALTTLVINKLRGTLNVVAVKAPAFGDRRKAILEDIAILTGGEVIS
EEKGMKLEEATIEQLGKAKTVKVTKDLTVIVDGGGQQKDISARVNLIKAQIEETTSDYDK
EKLQERLAKLSGGVAVIKVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTILLDI
IESMKDFNETGEIAMGIEIVKRALEAPIKQIAENCGLNGGVVLEKVRMSPKGFGFDARNE
KFVNMIESGIIDPAKVTRAAIQNSTSVASLLLTTEVVIANKKEEEKAPMGAGGMMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattataaattttaatgatgaagctagaaaaaaattagaaattggggttaat
acacttgcagatgcagtaaaaattacattaggaccaagaggtagaaatgtagttcttgaa
aagtcttatggagcacctttaattaccaatgatggtgttacaatagcaaaagaaattgaa
ttggaagatccatttgaaaatatgggtgcagcattagttaaagaagttgctattaaatca
aatgatgttgcaggagatggaacaacaacagctacaatcttagcacaagctattgttaaa
gaaggattaaaaatgttgagtgctggtgcaaatccagttttcttaaagaagggaattgaa
cttgcagcaaaagaagctattgaaattttaagagataaagctaaaaaaattgaatctaat
gaagaaatttcacaagttgcatctatttcagctggtgatgaagaaataggtaaattaatt
gctcaagctatggcgaaagttggtgaaacaggagtaataactgttgaagaagctaaatct
ttagaaacaactttggaaactgttgaaggaatgcaatttgacaaagggtatgtttctcca
tatatggttacagattctgaaagaatgacagcagaacttgataatcctttaatcttattg
acagataaaaaaatttcttcaatgaaagaattattacctttacttgaacaaacagtacaa
atgtctaagccagttttaattgtggctgatgatattgaaggagaagctctaacaactctt
gttataaataaattaagaggaactttaaatgttgttgctgttaaagcccctgcttttgga
gatagaagaaaggctatacttgaagatattgctatcctaactggtggagaagttatatca
gaagaaaaaggaatgaaattagaagaagctactattgaacaattaggaaaagctaaaact
gttaaagttacaaaagacttaactgtaattgttgatggtggaggacaacaaaaagatata
tctgccagagttaatttaataaaagctcaaatagaagaaacaacttctgattatgataaa
gaaaaattacaagaaagacttgcaaaattatctggtggagttgctgtaataaaagttgga
gctgccacagaagttgaaatgaaagataaaaaattaagaatagaagatgctttaaatgct
acaagagcagctgttgaagaaggaatagttgcaggtggaggaactattttacttgatatc
attgaatcaatgaaagatttcaatgaaactggtgaaatagctatgggtattgaaattgtt
aaaagagctttggaagcacctataaaacaaatagctgaaaactgtggattaaatggtgga
gtagttttagaaaaagtaagaatgtctccaaaaggttttggctttgatgctagaaatgaa
aaatttgtcaatatgatagaatctggaattattgacccagcgaaagttacaagagctgct
atacaaaattctacttctgttgcatctttacttttaacaacagaagttgtcattgcaaat
aagaaggaagaagaaaaagctccaatgggagctggtggaatgatgccaggaatgatgtaa
DBGET
integrated database retrieval system
