Fusobacterium vincentii 3_1_36A2: HMPREF0946_00554
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Entry
HMPREF0946_00554 CDS
T02822
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
fnc
Fusobacterium vincentii 3_1_36A2
Pathway
fnc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0946_00554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnc03400
]
HMPREF0946_00554
DNA repair and recombination proteins [BR:
fnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0946_00554
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0946_00554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_21
nSTAND3
Viral_helicase1
AAA_24
ATPase_2
FtsK_SpoIIIE
DnaJ_CXXCXGXG
T2SSE
AAA_23
cobW
RNA12
Motif
Other DBs
NCBI-ProteinID:
EEU32481
UniProt:
C7XP39
LinkDB
All DBs
Position
1304659..1307496
Genome browser
AA seq
945 aa
AA seq
DB search
MIDKITIKGARQHNLKNIDVELPKNEFIVITGVSGSGKSSLAFDTIYSEGQRRYVESLSA
YARQFIGQMNKPEVDSIEGLSPAISIEQKTTNRNPRSTVGTITEVYDYLRLLFAHIGTAH
CPICHTAVEKQSVDEIVESVMTKFDDGSKIILLAPVVKDKKGTHKNIFLNLFKKGFVRAR
VNGEVLYLEDEIELDKNKKHNIEVVVDRLVLKKDDKDFESRLTQSIETATDLSNGKLIVN
DGKNDYLYSENYSCPNHEDVSIPELNPRLFSFNAPYGACPECKGLGKKLEVDENKLIENP
ELSIEDGGMYIPGAMARKGYSWEIFKAMAKAAKIDLTKPVKDLTKKELDIIFYGYDEKFK
FDYTGGDFDFHGYKEYEGAVKNLERRYYESFSEAQKEEIENRYMVERICKVCNGKRLKDE
VLAVTVNGKNIMEICDMSIKNSLNFFMNMNLTEKQEKIAKEILKEIRERLTFMTNVGLDY
LTLSRETKTLSGGESQRIRLATQIGSGLTGVLYVLDEPSIGLHQKDNDKLLATLNRLKEL
GNTLIVVEHDEDTMMQADKILDIGPGAGEFGGDVVAFGSPKEIMKNKNSITGKFLSGKEE
IEIPKKRRKWNKSIKLYGAKGNNLKNIDVEFPLGVMTVVTGVSGSGKSTLVNSTLYPILF
NKLNKGKLYPLEYEKIGSLDGLEKVINIDQTPIGRTPRSNPATYTKLFDDIRDIFAETQD
AKLHGFKKGRFSFNVKGGRCEACQGAGILKIEMNFLPDVYVECEVCKGKRYNKETLDVYY
KGKNIYDVLEMSVLEAYEFFKNIPSLERRLKVLIDVGLDYIKLGQPATTLSGGEAQRIKL
ATELSKMSKGNTVYILDEPTTGLHFQDIKKLLEVLNRLLEKGNTVIIIEHNLDVIKTADY
IIDIGVDGGENGGTIVATGTPEEVAKSKKSYTGKYIAKILKKSKK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgatagataaaattactataaagggagcaagacagcataatttaaaaaatatagatgtt
gaactccctaaaaatgaatttattgttataacaggtgtaagtggaagtggaaaatcttct
cttgcctttgatacaatttattcagaaggacaaagaagatatgtagaaagtctttcagct
tatgcaagacaatttataggacaaatgaataaaccagaagttgacagcattgaaggttta
tctcctgcaatctcaatagaacaaaaaactacaaatagaaatcctcgttcaacagttgga
acaattacagaagtttatgattatttaagacttttatttgcacatataggaactgcacac
tgtccaatttgtcatacagcagttgaaaaacaaagtgtagatgaaattgttgaaagtgtt
atgacaaaatttgatgatggaagcaaaattattttgttagcacctgttgttaaagataaa
aaaggtactcataaaaatatatttttaaatttatttaaaaagggctttgtaagagcaaga
gtaaatggagaagtactttacttagaagatgaaatagaacttgataagaataaaaaacat
aatatagaagttgttgtagatagattagttttaaaaaaagatgataaagattttgagagt
agattaactcaatcaatagaaacagcaacagatttatctaatggaaaattaattgtaaat
gatggaaaaaatgattatttatacagtgaaaattattcttgtcctaatcacgaagatgta
agtattcctgaattaaatccaagactattttcatttaatgcaccttacggggcttgtcct
gaatgtaaaggtttaggaaaaaagttggaagttgatgaaaataaattgatagaaaatcct
gagctatctattgaagatggaggaatgtatataccaggagctatggcaagaaaaggatac
agctgggaaatctttaaagctatggctaaggcagccaaaattgatttaactaaacctgtt
aaagatttaactaaaaaagagttagatataatattttatggctatgatgagaaatttaag
tttgactatactggtggagattttgattttcatggctataaagaatatgaaggagctgtt
aaaaatttagaaagaagatactatgaaagtttttcagaagcccaaaaagaagaaattgaa
aatagatatatggttgaaagaatttgtaaagtttgtaatggaaaaagattaaaagatgaa
gttctagcagtaactgtcaatggtaaaaatattatggaaatctgtgatatgagtatcaaa
aattctcttaatttttttatgaatatgaatttaactgaaaaacaagaaaaaattgctaag
gaaattctaaaagaaataagagaaagattaacatttatgactaatgttggtttagattat
ttgacactttcaagagaaactaaaactttatcaggtggagaatctcaaagaataagactt
gcaactcaaataggttctggacttacaggtgtactatatgttttagatgaaccaagtata
ggactacatcaaaaagataatgataaattacttgcaactttaaatagacttaaagagtta
ggaaatactttaatagtggttgaacacgatgaagatactatgatgcaagcagataaaata
ttggatataggaccaggagctggggagtttggaggagatgttgtagcctttggaagtcca
aaagaaataatgaagaataagaattctatcacaggaaaatttttaagtggtaaagaagaa
attgaaattcctaaaaaaagaagaaaatggaataaatctattaaactttatggtgcaaaa
ggaaacaatttaaaaaatatagatgtagaatttccattaggagttatgactgttgttaca
ggagtaagtggaagtggaaaatcaactcttgtaaactcaacactttatccaattttattt
aataaattaaataaaggaaaattatatccattggaatatgaaaaaattggaagcttagat
ggtttagaaaaagttattaatatagaccaaactccaataggaagaactccaaggtctaat
cctgcaacttatacaaaactttttgatgatattagggatatttttgcagaaacacaagat
gcaaaacttcatggatttaaaaaaggtagattttcatttaatgttaaaggtggaagatgt
gaggcttgtcaaggtgcaggaattttaaagattgaaatgaatttcctacctgatgtctat
gtggaatgtgaagtttgtaagggaaaaagatataataaagaaacattagatgtgtactat
aaaggtaaaaatatttatgatgtcttagaaatgagtgtacttgaagcttatgaattcttt
aaaaatattccatctttggaaagaagattaaaagttttaatagatgtaggtttggactat
ataaaacttggacaacctgcaacaactctatctggtggagaagcacaaagaattaaactt
gcaactgagctttctaaaatgagtaagggtaacactgtatatattttagatgagcctaca
acaggattacatttccaagatattaaaaaattattagaagttttaaatagacttttagaa
aagggtaacactgttataataattgaacataatcttgatgttataaaaactgctgattat
ataatagacataggtgtagatggtggagaaaatggtggaactattgttgctactggaaca
ccagaagaagtagctaaatctaaaaaaagttatacaggaaaatatattgctaaaatttta
aagaagtccaaaaaataa
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