Fusobacterium vincentii 3_1_36A2: HMPREF0946_01303
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Entry
HMPREF0946_01303 CDS
T02822
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fnc
Fusobacterium vincentii 3_1_36A2
Pathway
fnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0946_01303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnc03019
]
HMPREF0946_01303
03016 Transfer RNA biogenesis [BR:
fnc03016
]
HMPREF0946_01303
Enzymes [BR:
fnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HMPREF0946_01303
Messenger RNA biogenesis [BR:
fnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HMPREF0946_01303
Transfer RNA biogenesis [BR:
fnc03016
]
Prokaryotic type
tRNA degradation factors
HMPREF0946_01303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SAC3
KH_2
Motif
Other DBs
NCBI-ProteinID:
EEU33230
UniProt:
C7XR07
LinkDB
All DBs
Position
2052851..2054950
Genome browser
AA seq
699 aa
AA seq
DB search
MFDEKIMELELAGRTLKVSTGKISRQSSGAIVIQYGDTVLLSTANRSKDARKGADFFPLT
VDYIEKFYSSGKFPGGFNKREGRPSTNATLVARLIDRPIRPMFPDGFNYDVHIVNTVLSY
DEINIPDYLGVIGSSLALMISDIPFLGPVASVIVGYKNGEFILNPSPKELEESELDLIVA
GTKEAVNMVEAGAKELDEETMLKAIMFAHENIKKICEFQEEFSKLYGKENIEFEKPEVLT
LVKNFIDTNGYERLQQAVLTTGKKNREDAVDSLEEELMEKFIQENYPDVPEEELPEDIIL
EFKTYYHDLMKKLVREAILYHKHRVDGRTTTEIRPLDAQINVLPVPHGSALFTRGETQSL
AITTLGTKEDEQLIDDLEKEYYKKFYLHYNFPPYSVGEVGRMGSPGRRELGHGSLAERAL
SYVIPSEEEFPYTIRVVSEITESNGSSSQASICGGSLSLMSAGVPIKEHVAGIAMGLIKE
GEEFTVLTDIMGLEDHLGDMDFKVAGTKSGITALQMDIKITGITEEIMRIALNQAHEARI
QILELMNNTISKPAELKSNVPRIQQITIPKDKIAVLIGPGGKNIKGIIDQTGSTVDITDD
GLVSVFAKDAETLEKTLKLIDGFVREVEYGEVYEGRVVSIMKFGAFMEILPGKEGLLHIS
EISPERVDKVEDVLSVGDVFKVRVISMEGGKISLSKKKV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgaaaaaattatggagctagaacttgctggaagaactttaaaagtttcaact
ggtaaaatttctagacaatctagtggagctattgtaattcaatatggggatacagttctt
ctatctactgctaatcgtagtaaagatgcaagaaaaggtgcagactttttccctttaact
gttgactatatagaaaaattttattcaagtggtaaatttccaggaggatttaataaaaga
gaaggaagaccttcaacaaatgcaacattggttgcaagacttattgatagaccaataaga
ccaatgtttccagatggatttaactatgatgtacatatagttaatactgttctatcttat
gatgaaataaatatacctgattatttaggtgtaattggttcatctcttgcacttatgatt
tctgatatcccattcttaggacctgttgcaagtgtaatagttggatataaaaatggagaa
tttattttaaatccttctccaaaagaattggaagaaagtgaacttgatttaattgttgca
ggaacaaaagaagctgtaaatatggttgaagcaggagcaaaagaattagatgaagaaact
atgttaaaagcaatcatgtttgcacatgaaaatataaaaaagatttgtgaatttcaagaa
gaattttcaaaattatatggaaaagaaaatatagaatttgaaaaacctgaagtattaact
cttgttaaaaactttattgatactaatggatatgaaagattacaacaagctgttttaact
actggtaaaaagaatagagaagatgctgttgactcattagaagaagaattgatggaaaaa
tttatacaagaaaattatcctgatgttccagaagaagaattaccagaagatataatatta
gaatttaaaacttattaccatgatttaatgaaaaaattggttagagaagctattttatat
cataaacatagagttgatggaagaacaacaaccgaaataagaccattagatgctcaaata
aatgtattgcctgttcctcatggttcagcattatttacaaggggagaaactcaatctctt
gcaattacaacattaggaactaaggaagatgagcaattaatagatgatttagaaaaagaa
tattataaaaaattctatttacattataatttccctccatattcagttggagaagtcgga
agaatgggttcacctggaagaagagaattaggacatggttcacttgctgaaagagcttta
agttatgttattcctagtgaagaagagtttccttacactataagagttgtatctgaaatt
actgaatctaatggttcatcttcacaagcttctatctgtggtgggtcattatcacttatg
tcagctggtgttcctataaaagaacatgttgctggtatagcaatggggcttattaaagag
ggagaagaatttacagttctaacagatataatgggacttgaagaccatttaggggatatg
gatttcaaggttgctggtacaaaatctggaatcacagctttacaaatggatattaaaatt
acaggtataactgaagaaattatgagaattgccttaaatcaagctcatgaagctagaata
caaatattggagcttatgaataatacaatctctaaacctgctgaattaaaatctaatgta
cctagaatacaacaaataactattccaaaagataagattgcagttcttattggaccaggt
ggaaaaaatattaaaggtatcatagatcaaacaggttcaactgttgatataacagatgat
gggcttgtatctgtttttgcaaaagatgctgaaacattagagaaaactttaaaacttata
gatggttttgtaagagaagttgagtacggtgaagtatatgagggaagagttgtttcaata
atgaaatttggtgcatttatggaaattttacctggtaaagaaggtctacttcatatttct
gaaatctcaccagaaagagttgacaaagttgaagatgtactttcagttggagatgtattc
aaagtaagagttatttctatggaaggtggaaaaatctctttaagtaaaaagaaggtttaa
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