Flavobacterium nakdongensis: RF683_00605
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Entry
RF683_00605 CDS
T10681
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fnd Flavobacterium nakdongensis
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fnd03016
]
RF683_00605 (truB)
Enzymes [BR:
fnd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RF683_00605 (truB)
Transfer RNA biogenesis [BR:
fnd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RF683_00605 (truB)
Prokaryotic type
RF683_00605 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WMW77978
UniProt:
A0ABY9R9S0
LinkDB
All DBs
Position
complement(157749..158447)
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AA seq
232 aa
AA seq
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MNTESILEGQILLIDKPLTWSSFQAVNKLKYALKRQFELPKKFKIGHAGTLDPLASGLLI
ICTGKFTKKITEIQAQEKEYTGTIFVGATTPSYDLETEIDARFSTEHITEALIFEITKEF
MGEIDQKPPVFSAIKKDGKRLYEHARAGEDVEIKARKTTIYEFEITRIALPEIDFRITCS
KGTYIRSLAFDFGKALGSGGHLTALRRTKIGNYTVSEAFCPIEFVNQLQHEL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgaatctattttagaaggacagatactactcatagataagccattaacttgg
tcttcttttcaagcagtcaataaattaaaatatgccttaaaacgccaatttgaattgcca
aaaaaattcaaaattggacatgcgggcactttagatcctttagcgtcaggtttgttaatc
atttgcacaggaaaattcactaaaaaaattacagaaattcaagcgcaagaaaaagagtat
acaggaacaatttttgttggtgccacaacaccttcctacgatttagaaaccgaaattgac
gccagattctcaaccgaacatattacagaagcgttaatttttgaaatcacaaaagaattt
atgggagaaattgatcaaaaacctcctgttttttctgccatcaaaaaagatggaaaacgc
ttatatgaacatgctcgtgcgggagaagatgttgaaattaaagcaagaaaaacgaccatt
tacgaatttgaaattacgcgcatagctttacctgagattgattttagaataacatgtagt
aaaggaacctatattcgctctttggcttttgactttggaaaggcattaggctctggaggt
catttaacggctttgcgccgaacgaaaattggcaattacactgtttctgaagccttttgt
cccatagaatttgtaaatcaattacaacatgaactatag
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