Flavobacterium nakdongense: RF683_01615
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Entry
RF683_01615 CDS
T10681
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
fnd Flavobacterium nakdongense
Pathway
fnd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RF683_01615 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnd03400
]
RF683_01615 (mutS)
DNA repair and recombination proteins [BR:
fnd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RF683_01615 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
nSTAND_NTPase5
MutS_C
AAA_29
Phage_T4_Y13C
Motif
Other DBs
NCBI-ProteinID:
WMW78898
UniProt:
A0ABY9RDE8
LinkDB
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Position
366474..369041
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AA seq
855 aa
AA seq
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MKQYNEIKAKYPDACLLFRVGDFYETFGSDAIRASQILGITLTKRGNGSESETALAGFPH
HSLNTYLPKLVKAGLRVAICDQLEDPKMTKTIVKRGVTELVTPGVAMNDDILQAKTNNFL
ASIHFGKKNIGIAFLDVSTGEFLTAQGSEEYIDKLLQNFRPSEILVTKNHKTTFKTAFGE
DFHAFYLEDWIYKEDYAFETLTKHFQTNSLKGFGIEEVMEGVVASGAILYYLSETQHNKI
QHITTIQRIAEDAYVWMDKFTIRNLELYHSTNPNAVTLLDVIDKTLSPMGSRLLKRWLAL
PLKDLVKIKARNEVVAYLKSNQEELQFIQYQIKQISDLERLISKVATGKISPREVLYLRD
SLQAILPIKEKALSAKNEALKIIGDGLHACELLREKIDTTLQEDAPVAINKGNAIAIGVH
PELDELRAISTTGKGYLEDLERRESEQTGIPSLKISFNNVFGYYIEVRNTHKDKVPENWI
RKQTLVNAERYITEELKEYESKILGAEEKIQQLENLLFEQLVSWMSTYIKPVQLNAHLIA
QLDCLQSFAQMAIENNYVQPELDDSHDLLIKEGRHPVIEKQLPPGVPYISNDVVLDREAQ
QIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAESLKLGLVDKIFTRVGASDNISMGE
STFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPSKPKTLFA
THYHELNEMEVIFDRIQNYNVSVKELKDTVLFIRKLVKGGSAHSFGIHVAKMAGMPQTVI
QKAQKLLKKLEKNHSAEELSGSLTGQEEMQLSFFHLDDPLLEEIKDELLTLDINTLTPVE
ALMKLNELKRIVSKK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatacaatgaaatcaaggcaaaatatcctgatgcatgtttgttatttagagta
ggggatttctatgaaacatttggttcagacgccattagagcttctcagattttaggaata
acattaactaagcgaggaaacggaagtgaaagcgaaacggcgctagcgggttttcctcac
cattctttaaacacgtatttgcctaaactagttaaagcggggcttcgagtagctatttgt
gaccaattagaagatccaaagatgacgaagacgatcgttaaacgtggcgtgacagagttg
gttacgccaggagttgcgatgaatgacgatattttacaggccaaaacaaataatttctta
gcttctatccattttggtaagaaaaatataggtattgcttttttagatgtttctacggga
gaatttttaaccgcacaaggttcagaggagtatattgataaattattgcaaaattttaga
ccaagtgaaatattggtcacaaaaaatcataaaacgacttttaaaaccgcatttggagaa
gatttccatgctttttatttagaagattggatttacaaagaagattatgcatttgaaact
cttacaaaacattttcaaacgaattctttgaaagggtttggtattgaagaagttatggaa
ggtgtagttgcttcaggggctattttatattatttgtctgaaacgcagcataacaaaata
caacacataaccactattcagcgtattgcagaagatgcttatgtgtggatggataagttt
actattcgcaatttagaattataccacagtacaaatccaaatgcagttaccttacttgat
gtaattgataaaacattatccccaatggggtcacgtttactaaaaaggtggttggctttg
cctttaaaagatcttgtcaaaattaaggctagaaatgaagtagtagcgtatttaaaatca
aatcaagaagagttgcaatttatacaatatcaaattaagcaaatttccgatttagaacga
ttaatttctaaagtagccacagggaaaatttcgcctcgagaggtactttatttacgcgat
tcattacaagctattttaccaattaaagaaaaggcattaagcgcaaagaatgaagcgtta
aaaattattggtgatggcttacatgcttgtgaattattgcgcgaaaagattgatactact
ctacaagaagatgctccggttgcaattaataaaggaaatgccatagcaataggtgtacat
cccgaattagatgaattacgtgctatttccacaacaggaaaagggtatttagaagattta
gaacgaagagaaagcgaacaaacaggcataccgtcattaaaaatatcgtttaataatgtt
tttggctattatattgaagtgcgtaatacacacaaagataaagtgcctgaaaactggata
agaaaacaaacattagttaatgccgaacgctatattacggaagaattaaaagaatatgaa
tctaaaatattaggtgcagaagaaaaaattcaacaattagagaatttactttttgagcaa
ttggtgagttggatgtcaacctatattaaacctgttcagttaaacgctcatttaattgcg
cagcttgattgtttacagtcttttgctcaaatggctattgagaataattacgtgcagcca
gaattagatgattcacatgatttacttattaaagaagggcgtcatcccgtaattgaaaaa
cagttgcctccaggagtgccttatatttctaatgatgttgttttagatagagaagcacaa
cagattatcatgattacggggccaaatatgtcgggtaagtcagctattttaagacagact
gctcttattgttttgttagctcaaatgggaagttttgtacctgccgagtcactaaagcta
ggacttgtagataaaatatttactcgagtaggagcaagtgataatatttctatgggtgaa
tctacctttatggtagaaatgaacgaaacagcctctatattaaataatatttcagataga
agtttggtgcttttagatgaaattgggagaggaacatctacttatgatggcatttcaatt
gcttgggctatttcagaatatttacatgaacatccaagtaagccaaaaacattatttgcg
acgcattatcatgagttaaatgaaatggaagttatttttgatcgcattcaaaattataat
gtatctgtcaaagaattgaaagatacggtattatttattagaaaattagtaaaaggagga
agcgcacatagttttggtattcatgtggcaaaaatggcgggaatgcctcaaacagttata
caaaaggctcaaaaattattaaaaaaattagaaaaaaatcattctgcagaagaattgtca
ggcagtctcacaggtcaagaagaaatgcagttaagcttttttcatttagatgatccttta
ttagaagaaattaaagacgaattacttacattagacattaatacacttacgcctgttgaa
gcattaatgaagttaaatgaattgaaacgtattgtttcaaaaaaataa
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