Flavobacterium nakdongensis: RF683_01985
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Entry
RF683_01985 CDS
T10681
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
fnd Flavobacterium nakdongensis
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnd03400
]
RF683_01985
Enzymes [BR:
fnd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RF683_01985
DNA repair and recombination proteins [BR:
fnd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RF683_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF2380
Motif
Other DBs
NCBI-ProteinID:
WMW78235
LinkDB
All DBs
Position
complement(441549..443084)
Genome browser
AA seq
511 aa
AA seq
DB search
MHKILRLVLGDQLNSNHSWFQEKNDATTYVLMEVRSETDYVQHHIQKIAGIFAAMRNFAS
ELTAKNHHVLYIKINDENNLHSFEKNIKQLIELYQFSYFEYQLPDEYRVDQHVQELCKTI
SIPSKACDTEHFFSERNELATFFNGKKTYIMENFYRMMRKKHHVLMEGDKPLTGKWNYDQ
DNRKKLPKNHVPVQPYIFNNDVSEIVTEIKKAGITFIGEIDEKKLLWPINRDQALQLLHF
FISECLGYFGDYQDAMVPNLWSMYHSRLSFALNVKLISPLEVITAAVEAWNANPEKISYN
QLEGFVRQILGWREFMRGVYWAKMPEFAHLNYFKYSNKLPHWFWTGKTKMNCVRDAIEQS
LHYAYAHHIQRLMITGNFLLLAETDPDEVDQWYLGIYIDAFEWVELTNTRGMSQFADGGI
VGTKPYVSSSSYIHKMSSYCSTCFYKKEVKTGEKACPFNSLYWNFYNRNENLLRTNPRIA
MMYKVWDKMKSEEKTALLSQAAYYLKKVNEL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaattttacgtcttgttttgggcgaccagttaaatagcaatcattcatggttt
caagaaaaaaacgatgcaactacgtatgtgttaatggaagtaagaagtgaaacagactat
gtacagcatcacattcaaaaaattgcaggaatatttgccgccatgcgaaattttgcttct
gaactaaccgctaaaaatcatcacgtactatacatcaaaataaatgatgaaaacaatcta
cattcttttgaaaaaaacatcaaacaactaattgaactttaccaattttcatattttgaa
tatcaactccccgatgaatatagagtagaccaacacgtacaagaactttgtaaaacaatc
tcaattccttcaaaagcatgcgatacagagcatttttttagcgaaagaaacgagttagcc
acattttttaatggcaaaaaaacctatatcatggagaacttttatcgaatgatgcgtaaa
aaacaccatgttttgatggaaggcgacaaacctttgacaggaaaatggaattatgatcag
gataatagaaaaaaattacctaaaaatcatgtgcctgttcaaccgtatatttttaacaac
gatgtttctgaaattgtaacagaaatcaaaaaagcaggtattacatttattggagaaatt
gatgaaaaaaaactattatggccaataaaccgcgaccaggctttacaattactccatttt
tttatttcagaatgtttaggctattttggagattatcaagatgccatggtacctaattta
tggtctatgtatcattctaggctttcttttgctttgaatgtcaaattaatttccccatta
gaagttattactgcggctgttgaagcttggaacgctaatccagaaaaaattagctacaac
caacttgaagggtttgtgagacaaattctaggatggagagaatttatgagaggtgtttac
tgggcaaaaatgcctgaatttgctcatcttaattattttaaatactcaaataaattaccc
cattggttttggacaggaaaaacaaaaatgaattgtgttcgagatgcgatagaacaatcc
cttcattatgcctatgcacatcatattcagcgcttaatgattactggaaattttttactc
ttagcagaaacagatcctgatgaagttgatcaatggtatttaggtatatatatagatgca
tttgaatgggttgaactaacaaacacaagaggaatgagccaatttgcagatggtggtatt
gtaggaacaaaaccttatgtaagttcgtcttcatatatacataaaatgagtagttattgc
tcaacttgtttttacaaaaaagaagtgaaaacaggtgaaaaagcatgcccttttaatagt
ttatattggaacttttacaatcgaaatgaaaatttacttagaactaatccaagaattgca
atgatgtataaagtgtgggacaaaatgaaatctgaagaaaaaacagcactactcagtcaa
gcagcttattatttaaaaaaagtaaatgaactatga
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