Flavobacterium nakdongensis: RF683_02965
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Entry
RF683_02965 CDS
T10681
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd00300
Lysine biosynthesis
fnd00470
D-Amino acid metabolism
fnd01100
Metabolic pathways
fnd01110
Biosynthesis of secondary metabolites
fnd01120
Microbial metabolism in diverse environments
fnd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RF683_02965 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RF683_02965 (dapF)
Enzymes [BR:
fnd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RF683_02965 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
GDH_ACT1
Motif
Other DBs
NCBI-ProteinID:
WMW78423
UniProt:
A0ABY9RB05
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Position
703875..704654
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AA seq
259 aa
AA seq
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MQVTFYKYQGTGNDFIIIDNRQLDFPKNDTKLIARLCDRRFGIGADGLMLLEQHESYDFR
MIYYNADGSTSTMCGNGGRCLVAFAKKLGLVISEAHFEASDGYHYAKINGDTIALQMIDV
TEIKMNDTYQFVYTGSPHHVELVTNLNDYDVKMCGAKIRYSDLYGASGSNVNFVEQENEN
TFKVRTYERGVEDETLSCGTGVTAVAIAMHQLRKTLSTSIDLLVPGGKLQVRFSKEGQHY
KNIFLIGPAEFVFEGNIKL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaactttttataaataccaaggaacaggaaatgattttattattatagataat
cgtcagcttgattttcccaaaaatgataccaaattaattgctcgtctttgcgaccgacgt
tttggcataggtgctgatggtcttatgctgttagaacaacatgaatcgtatgattttaga
atgatttattataatgctgatgggagtacaagtactatgtgtggtaatggaggccgttgt
ttagtggcatttgctaaaaaattagggctagttatttctgaggcacattttgaagcttct
gacggctatcattatgctaaaataaatggtgacactattgcattacaaatgatagatgtt
actgaaattaagatgaatgatacctatcaatttgtatatacaggttcgccacatcatgta
gaattggtaacaaatttgaatgattatgatgtaaaaatgtgcggcgcaaaaattagatac
tcagatttatatggtgcttctggtagtaatgttaattttgtagaacaagaaaatgaaaat
acattcaaagtgcgaacatatgagcgtggtgtagaagacgaaaccttatcttgtggaaca
ggagttactgccgtggcaattgctatgcatcaattgcgtaaaactttatcaactagtatt
gatctactagtgcctggtggaaaattacaagtgcgtttttcaaaggaaggacaacactat
aaaaatatttttttaattggccctgctgaattcgtttttgaaggaaatataaaactatag
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