Flavobacterium nakdongensis: RF683_05120
Help
Entry
RF683_05120 CDS
T10681
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RF683_05120 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fnd03021
]
RF683_05120 (rho)
03019 Messenger RNA biogenesis [BR:
fnd03019
]
RF683_05120 (rho)
Transcription machinery [BR:
fnd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RF683_05120 (rho)
Messenger RNA biogenesis [BR:
fnd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RF683_05120 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
AAA
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
WMW78827
UniProt:
A0ABY9RC72
LinkDB
All DBs
Position
complement(1136552..1138165)
Genome browser
AA seq
537 aa
AA seq
DB search
MFDNNTLKEMKLSDLQEIAKVANIQKFKTLKKEALIQQILEVQNAAEVVEKPKKVNSSEK
ITPKKNIQEETQTDHSSEKKVANEPRKRIKKSEVIQKAAQEEIVFKEDSKPQNTGVISNK
IGDDSQISKSEEGEPQERNGGNFKKNPNFKKNNPNQKPNYRDNDFEFDGIIESEGVLEMM
PDGYGFLRSSDYNYLASPDDIYLSQSQIRLFGLKTGDTVKGVVRPPKEGEKFFPLVKVLK
INGHDPQVVRDRIAFEHLTPLFPDEKLNLADRSKAISTRIIDLFAPIGKGQRAMIVAQPK
TGKTMLLKDIANSIAANHPEVYMIVLLIDERPEEVTDMQRSVRAEVIASTFDEPAERHVK
VANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRFF
GAARNIENGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQLDRRIANKRIFPAIDLV
SSSTRRDDLLLDEKTIQRMWILRKYLADMNPVESMEFIESRIKGTRNNEEFLISMND
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataataacacgttaaaagagatgaaactctctgatttgcaagaaatagccaaa
gttgcaaacattcaaaaattcaaaaccttaaaaaaagaagcgttaattcaacaaatttta
gaagttcaaaatgcagctgaagtagttgaaaaacctaaaaaggtgaatagttctgaaaag
ataacgcctaaaaaaaacatacaagaagaaacgcaaacagatcactcttcagagaaaaaa
gtagccaatgagcctagaaagcgcattaaaaaatctgaagtgattcaaaaagcagctcag
gaagaaattgtttttaaagaagacagtaaacctcaaaacacaggtgtaatttccaataaa
ataggtgatgacagccaaatttcaaagtcagaagagggagaaccacaagaacgaaatggg
ggtaattttaaaaagaaccctaattttaaaaagaataatccaaatcaaaaacctaattat
agagataatgactttgagtttgatggaattattgaaagtgaaggtgttttagaaatgatg
ccagacggatatggcttccttcgttcttcagattataattatttagcttctccggatgat
atttatttatcacaatcacaaattagattatttggtttaaaaacaggtgatacggttaaa
ggagttgtgcgtcctccaaaagagggggaaaaattctttcctttggtaaaagttttaaaa
attaatggtcatgatcctcaagttgttcgtgacagaattgcttttgaacatttaacacct
ttatttccagatgaaaaattaaatttggccgataggagtaaagctatctcaacccgcata
attgatttatttgcacctattggtaaaggtcaacgcgctatgattgttgcacaaccaaag
acgggtaaaacgatgttgcttaaagatattgcaaattctatagctgcaaaccatcctgaa
gtatatatgattgttttgcttattgatgagcgaccagaagaggtaaccgatatgcaacgt
tcagttcgagcagaagtaatcgcatctacttttgatgaacccgcagaacgacatgttaaa
gtagcaaatattgtattagaaaaagcaaaacgtttagttgaatgcggacatgatgtggtt
attttattagattcaataactcgtttagcaagagcttataatacagtgcaaccagcatca
ggtaaggtgttaagcggcggtgttgatgcgaatgcattacaaaaaccaaaacgtttcttt
ggtgcggctcgaaatattgaaaatggtggttcgttgagtattattgcaactgcattaaca
gaaacaggttctaaaatggatgaagttatctttgaagaattcaaaggtacaggtaacatg
gaattacaattagatagaagaattgcaaataaacgaatcttcccagctattgatttagta
tcatcaagcacaagaagagatgatttattactagatgaaaaaacaattcaacgcatgtgg
attttaagaaaatatttagcagatatgaaccctgttgaatcgatggaattcattgagtct
agaattaaaggtacacgaaataacgaagagtttttgatttcgatgaatgattaa
DBGET
integrated database retrieval system
