KEGG   Flavobacterium nakdongensis: RF683_05505
Entry
RF683_05505       CDS       T10681                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
fnd  Flavobacterium nakdongensis
Pathway
fnd00260  Glycine, serine and threonine metabolism
fnd00460  Cyanoamino acid metabolism
fnd00630  Glyoxylate and dicarboxylate metabolism
fnd00670  One carbon pool by folate
fnd00680  Methane metabolism
fnd01100  Metabolic pathways
fnd01110  Biosynthesis of secondary metabolites
fnd01120  Microbial metabolism in diverse environments
fnd01200  Carbon metabolism
fnd01230  Biosynthesis of amino acids
fnd01240  Biosynthesis of cofactors
fnd04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:fnd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    RF683_05505 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    RF683_05505 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RF683_05505 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    RF683_05505 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    RF683_05505 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    RF683_05505 (glyA)
Enzymes [BR:fnd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     RF683_05505 (glyA)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_1_2 DegT_DnrJ_EryC1 WD40_Prp19
Other DBs
NCBI-ProteinID: WMW76957
LinkDB
Position
1235750..1237024
AA seq 424 aa
MQRDEQLFDLILDEQDRQIHGIELIASENFVSDQVMEAAGSCLTNKYAEGYPGKRYYGGC
EVVDIVEQIAIDRAKALFGAEYVNVQPHSGSQANTAVFAACLQPGDKILGFDLAHGGHLT
HGSPVNFSGKLYKPSFYGVEQETGRLNYDKIQEIALAEKPKMIIAGASAYSRDMDFKRFR
EIADSVGALLLADISHPAGLIAKGLLNDPIPHCHIVTTTTHKTLRGPRGGMIMMGKDFEN
PWGLTTPKGEIRMMSHILDMAVFPGNQGGPLMHIIAAKAVAFGECLTDEFFRYALQVQKN
AQAMAEAFVKRGYNLISGGTDNHMMLIDLRNKNITGKEAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTPAITTRGLVESDMETVVALIDKVIMHHTDEAVLEQVADEVNELMGERP
IFTF
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgcaacgcgacgaacaactattcgaccttattttagatgagcaagacagacaaattcac
ggaattgagttaattgcttcagaaaattttgtaagtgaccaagtaatggaagctgcaggt
tcttgtttaacgaataaatatgctgaaggataccctggtaaacgttactatggtggttgt
gaagtagtagatattgtagaacaaattgctattgacagagccaaagctttatttggtgcc
gaatatgtaaacgtacaaccccactcaggttctcaggctaacaccgcagtttttgctgcc
tgcttacaacctggcgataaaatattaggttttgatttagcacacggtggacatttaacg
cacggttcgccggttaacttttcaggaaaattatacaaaccttctttctatggcgtagaa
caagaaacgggacgattaaactacgataaaattcaagaaatagctttagcagaaaagcca
aaaatgattattgcaggtgcatcagcctattcacgtgatatggattttaaacgctttaga
gaaattgctgattcggtaggcgctttgttattagcagatatttcacacccagctggattg
attgctaaaggcttattaaacgatcctataccgcattgtcatattgtaaccaccactaca
cacaaaacattacgtggccctagagggggtatgattatgatgggtaaagattttgaaaac
ccttggggattaaccactccaaaaggcgaaatcagaatgatgtcacatattttagacatg
gcggtttttccaggaaaccaaggcggacctttaatgcatatcatagcagctaaagcagta
gcttttggtgaatgtttaacagatgaatttttccgttatgcgttgcaagtacaaaaaaat
gcacaagcaatggcagaagcatttgtaaaaagagggtataatttgatttctggtggtaca
gacaaccacatgatgttgattgacttaagaaacaaaaacattacaggtaaagaagcggaa
aatgcattagtaaaagcggaaatcacggtaaacaaaaacatggttccttttgacgataag
tcgcctttcgttacatcgggtattcgtgtgggtacacctgctattacaacaagaggttta
gtagaatccgatatggaaacagtagtagccttaattgacaaagtcattatgcatcatacg
gatgaagcggtgttagaacaagtagctgacgaagtaaatgaattaatgggcgaaagacct
attttcactttttaa

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