Flavobacterium nakdongensis: RF683_05505
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Entry
RF683_05505 CDS
T10681
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd00260
Glycine, serine and threonine metabolism
fnd00460
Cyanoamino acid metabolism
fnd00630
Glyoxylate and dicarboxylate metabolism
fnd00670
One carbon pool by folate
fnd00680
Methane metabolism
fnd01100
Metabolic pathways
fnd01110
Biosynthesis of secondary metabolites
fnd01120
Microbial metabolism in diverse environments
fnd01200
Carbon metabolism
fnd01230
Biosynthesis of amino acids
fnd01240
Biosynthesis of cofactors
fnd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RF683_05505 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RF683_05505 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RF683_05505 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RF683_05505 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RF683_05505 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RF683_05505 (glyA)
Enzymes [BR:
fnd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RF683_05505 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
WMW76957
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Position
1235750..1237024
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AA seq
424 aa
AA seq
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MQRDEQLFDLILDEQDRQIHGIELIASENFVSDQVMEAAGSCLTNKYAEGYPGKRYYGGC
EVVDIVEQIAIDRAKALFGAEYVNVQPHSGSQANTAVFAACLQPGDKILGFDLAHGGHLT
HGSPVNFSGKLYKPSFYGVEQETGRLNYDKIQEIALAEKPKMIIAGASAYSRDMDFKRFR
EIADSVGALLLADISHPAGLIAKGLLNDPIPHCHIVTTTTHKTLRGPRGGMIMMGKDFEN
PWGLTTPKGEIRMMSHILDMAVFPGNQGGPLMHIIAAKAVAFGECLTDEFFRYALQVQKN
AQAMAEAFVKRGYNLISGGTDNHMMLIDLRNKNITGKEAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTPAITTRGLVESDMETVVALIDKVIMHHTDEAVLEQVADEVNELMGERP
IFTF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaactattcgaccttattttagatgagcaagacagacaaattcac
ggaattgagttaattgcttcagaaaattttgtaagtgaccaagtaatggaagctgcaggt
tcttgtttaacgaataaatatgctgaaggataccctggtaaacgttactatggtggttgt
gaagtagtagatattgtagaacaaattgctattgacagagccaaagctttatttggtgcc
gaatatgtaaacgtacaaccccactcaggttctcaggctaacaccgcagtttttgctgcc
tgcttacaacctggcgataaaatattaggttttgatttagcacacggtggacatttaacg
cacggttcgccggttaacttttcaggaaaattatacaaaccttctttctatggcgtagaa
caagaaacgggacgattaaactacgataaaattcaagaaatagctttagcagaaaagcca
aaaatgattattgcaggtgcatcagcctattcacgtgatatggattttaaacgctttaga
gaaattgctgattcggtaggcgctttgttattagcagatatttcacacccagctggattg
attgctaaaggcttattaaacgatcctataccgcattgtcatattgtaaccaccactaca
cacaaaacattacgtggccctagagggggtatgattatgatgggtaaagattttgaaaac
ccttggggattaaccactccaaaaggcgaaatcagaatgatgtcacatattttagacatg
gcggtttttccaggaaaccaaggcggacctttaatgcatatcatagcagctaaagcagta
gcttttggtgaatgtttaacagatgaatttttccgttatgcgttgcaagtacaaaaaaat
gcacaagcaatggcagaagcatttgtaaaaagagggtataatttgatttctggtggtaca
gacaaccacatgatgttgattgacttaagaaacaaaaacattacaggtaaagaagcggaa
aatgcattagtaaaagcggaaatcacggtaaacaaaaacatggttccttttgacgataag
tcgcctttcgttacatcgggtattcgtgtgggtacacctgctattacaacaagaggttta
gtagaatccgatatggaaacagtagtagccttaattgacaaagtcattatgcatcatacg
gatgaagcggtgttagaacaagtagctgacgaagtaaatgaattaatgggcgaaagacct
attttcactttttaa
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