Flavobacterium nakdongensis: RF683_07595
Help
Entry
RF683_07595 CDS
T10681
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fnd Flavobacterium nakdongensis
Pathway
fnd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RF683_07595 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnd03019
]
RF683_07595 (recQ)
03400 DNA repair and recombination proteins [BR:
fnd03400
]
RF683_07595 (recQ)
Enzymes [BR:
fnd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RF683_07595 (recQ)
Messenger RNA biogenesis [BR:
fnd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RF683_07595 (recQ)
DNA repair and recombination proteins [BR:
fnd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RF683_07595 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
WMW77351
LinkDB
All DBs
Position
complement(1707058..1709253)
Genome browser
AA seq
731 aa
AA seq
DB search
MRAHEIDLYKELKKYFGFTQFKGLQEQVVNSIISGNNTFVIMPTGGGKSLCYQLPALVLE
GTAIVVSPLIALMKNQVDAIRSLGSEIGVAHVLNSSLTKTEVNQVKADILSGKTKMLYVA
PESLTKEDYIQFLSDVKLSFVAIDEAHCISEWGHDFRPEYRNLRNIIRQLGDIPIIGLTA
TATPKVQEDILKNLDMPNANTFKASFNRPNLYYEVRPKTKNIEGDIIRFIKQHKGKSGVI
YCLSRKKVEEIAQVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGID
KPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMAGKPIAEQE
IGYALLQEVVAYAETSMSRRKYLLHYFGEEFNDVTGDGADMDDNVRNPKKKVEAKDEVVT
LLEVIRDTKQLFKPKEVIMALVGKINAIIKAQKIDTLSCFGSGADKDEKYWMALIRQILV
AGLITKDIESYGVIKITKVGEAFLKTPHSFLMTEDHEYSEEEDEAIVLASKATGTADEAL
MAMLKDLRKTEAKKHGVPPFVVFQDPSLEDMSLKYPITIDELSNVHGVGEGKAKKYGKPF
VELIERYVEDNDIIRPDDLVVKSTGANSGLKLYIIQNVDRKLALDDIASAKGLSMDDLLK
EMEQIVYSGTKINIKYWVDEILDEDQQEEIHDYFMESETDKIEDALKEFDGDYDTEELRI
MRIKFISEVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacacgagattgatttatacaaagaattaaaaaaatacttcggatttacccaa
tttaaagggttacaagaacaagtcgtaaacagtatcatatcaggaaataacacatttgtg
attatgccaacagggggaggaaaatcattgtgttaccaattacctgctttagttttagaa
ggaactgctattgttgtttctccgttaattgccttaatgaaaaaccaagttgatgccatt
agaagtctaggttcagagattggtgtagcacatgttttaaattcttcacttaccaaaacg
gaagtaaatcaggtaaaagcagatatactttcaggtaaaacaaaaatgttatatgtagca
ccagaatcattaacaaaagaagattatattcaatttttaagtgatgtaaaattgtctttt
gttgctattgacgaagcacattgtatatcagaatgggggcacgattttagaccagaatat
aggaatttaagaaatattattcgtcaattaggagatattcctattattggattaaccgct
acggcgacaccaaaagttcaagaggatatcctgaaaaatctagatatgcctaatgcaaat
accttcaaggcatcttttaatcgtcctaatttatactatgaagtacgaccaaaaactaaa
aatattgaaggagacatcattcgctttatcaaacaacataaaggaaaatcaggggttatt
tattgcttaagtagaaaaaaagttgaggaaatagcacaagttttacaagtaaatgggatt
tcagcggtaccctatcatgccggattagatgctaaaacaagagctaaacaccaagatatg
tttttgatggaagatgtggatgttgtggtggccaccatcgcttttgggatgggtattgat
aaaccagatgttcgttttgtaattcatcatgatattcctaagtctttagaaagctattac
caagaaacaggaagagcaggtcgtgatggtggcgaaggacattgtttagcctattattct
tataaggatattgaaaagttagaaaaatttatggctggcaaacctatagctgaacaagaa
attggctatgctctgttgcaagaagttgtcgcctatgcagaaacttcaatgtcaagaaga
aagtatttgttgcattattttggtgaagagtttaatgacgtaactggtgatggagccgat
atggatgataatgttagaaatcctaaaaagaaagttgaagccaaagatgaggtggtaaca
ctcttagaggtcattcgtgatacaaagcaattatttaagccaaaagaagttattatggct
cttgttggaaaaattaatgcaattattaaggctcaaaaaatagatacattgtcttgtttt
ggttcaggagctgataaagatgaaaaatattggatggcattaatacgtcaaatattagtg
gccggtttaattacaaaagatatagaaagctatggtgttataaaaatcactaaagttggt
gaagcatttttaaaaacaccacattctttcttaatgacagaagatcatgaatatagtgaa
gaggaagatgaagccatagtgctagcttctaaagcaactggaactgcagatgaggcctta
atggctatgctaaaagatcttcgtaaaacagaagcaaaaaaacatggcgtacctccgttt
gttgtgtttcaagatccttctttagaagatatgtctttaaaatatcctattacaatagat
gaattaagcaatgtgcatggtgtaggagaaggaaaagcaaaaaaatatggaaaaccgttt
gtagaattaatagaaagatatgtagaggataatgatattataagacccgatgatttagtg
gtaaaatctacaggggctaattctggattgaaattatacatcattcaaaatgtagataga
aaacttgcattagacgatattgcttctgcaaaaggattaagtatggatgatttgctaaaa
gaaatggagcaaatagtgtattcaggaactaaaattaacatcaaatattgggttgatgaa
attcttgatgaagatcaacaagaagaaattcatgattattttatggagtctgaaacagac
aaaatagaagacgccttgaaagaatttgatggggattatgacaccgaagaattgcgaata
atgcgcataaaatttataagtgaagtagcaaattaa
DBGET
integrated database retrieval system
